Burkholderia pseudomallei 2011756295 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Burkholderia pseudomallei 2011756295 RM systems
Ref: Batra,D. unpublished
REBASE ref # 24369
| Sequence length: | GenBank #: | |
| chromosome 1: | 4,224,888 bp | CP018391 |
| chromosome 2: | 3,273,436 bp | CP018392 |
REBASE acronym: Bps56295
Org_num: 24074
All begin BOC47_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 11360 | 81 aa hypothetical protein | |||
| 11365 | M | M.Bps56296ORF7235P (100% identity) | M.Bps56295ORF11365P | |
| 11370 | S | S.Bps56296ORF7235P (100% identity) | S.Bps56295ORF11365P | |
| 11375 | R | Bps56296ORF7235P (100% identity) | Bps56295ORF11365P | |
| 11380 | 87 aa hypothetical protein | |||
| 13830 | integrase | |||
| 13835 | S | S.BpsMSIII (100% identity) | CCANNNNNNNNRTGCC | S.Bps56295ORF13840P |
| 13840 | M | M.BpsMSIII (100% identity) | CCANNNNNNNNRTGCC | M.Bps56295ORF13840P |
| 13845 | R | 148 aa hypothetical protein | CCANNNNNNNNRTGCC | Bps56295ORF13840BP |
| 13850 | 100 aa hypothetical protein | |||
| 13855 | integrase | |||
| 13860 | R | BpsMSIIIP (84% identity) | CCANNNNNNNNRTGCC | Bps56295ORF13840AP |
| 13865 | GTP-binding protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 505 | helicase SNF2 | |||
| 510 | RM | BpsBSRORF1755P (95% identity) | Bps56295ORF510P | |
| 515 | chromosome segregation protein SMC | |||
| 8270 | LysR family transcriptional regulator | |||
| 8275 | M | M.Bps56296ORF4145P (100% identity) | M.Bps56295ORF8275P | |
| 8280 | 76 aa hypothetical protein | |||
| 17250 | 63 aa hypothetical protein | |||
| 17255 | M | M.Bsp617ORF3055P (90% identity) | M.Bps56295ORF17255P | |
| 17260 | 171 aa hypothetical protein | |||
| 17355 | 167 aa hypothetical protein | |||
| 17360 | M | M.Bsp617ORFAP (84% identity) | M1.Bps56295ORF17360P | |
| 17365 | M | M1.Xtr843ORF14900P (63% identity) | M2.Bps56295ORF17360P | |
| 17370 | 254 aa hypothetical protein | |||
| 17375 | 323 aa hypothetical protein | |||
| 17380 | V | V.PspJ604ORFEP (48% identity) | V.Bps56295ORF17360P | |
| 17385 | transposase | |||
| chromosome 2 | ||||
| 33275 | tryptophan synthase subunit alpha | |||
| 33280 | M | M.BspBGKORF4324P (100% identity) | GTWWAC | M.Bps56295ORF33280P |
| 33285 | tryptophan synthase subunit beta | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 14350 | 102 aa hypothetical protein | |||
| 14355 | R | BpsBGQORF4447P (100% identity) | CACAG | Bps56295ORF14360P |
| 14360 | M | M.Bps56296ORF10130P (100% identity) | CACAG | M.Bps56295ORF14360P |
| 14365 | 115 aa hypothetical protein | |||