Pseudomonas aeruginosa RIVM-EMC2982 |
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Putative Pseudomonas aeruginosa RIVM-EMC2982 RM systems
Ref: Witteveen,S. and Heide,Hvd. unpublished
REBASE ref # 24334
Complete sequence: 7,380,063 bp
GenBank #: CP016955
REBASE acronym: Pae2982
Org_num: 23952
All begin BFV99_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1630 | peptidase M15 | |||
| ??? | R | PaePAL01ORF31785P (100% identity) | CACNNNNNNNRTGT | Pae2982ORF1645P |
| 1645 | M | M.PaesAG1ORF6375P (100% identity) | CACNNNNNNNRTGT | M.Pae2982ORF1645P |
| 1650 | S | S.PaesAG1ORF6375P (100% identity) | CACNNNNNNNRTGT | S.Pae2982ORF1645P |
| 1655 | nuclease | |||
| 20465 | transposase | |||
| 20470 | R | PaesAG1ORF2679P (100% identity) | CCCANNNNNNTCG | Pae2982ORF20515P |
| 20475 | restriction endonuclease | |||
| 20480 | AAA family ATPase | |||
| 20485 | integrase | |||
| 20490 | 327 aa hypothetical protein | |||
| 20495 | helicase | |||
| 20500 | 547 aa hypothetical protein | |||
| 20505 | 245 aa hypothetical protein | |||
| 20510 | 731 aa hypothetical protein | |||
| ??? | S | S.PaesAG1ORF2671P (100% identity) | CCCANNNNNNTCG | S.Pae2982ORF20515P |
| 20515 | M | M.PaesAG1ORF2671P (100% identity) | CCCANNNNNNTCG | M.Pae2982ORF20515P |
| 20520 | 70 aa hypothetical protein | |||
| 33180 | transcriptional regulator | |||
| 33185 | R | PaesAG1ORF291P (100% identity) | ATGNNNNNNCCTC | Pae2982ORF33200P |
| 33190 | transcriptional regulator | |||
| 33195 | S | S.PaesAG1ORF291P (100% identity) | ATGNNNNNNCCTC | S.Pae2982ORF33200P |
| 33200 | M | M.PaesAG1ORF291P (100% identity) | ATGNNNNNNCCTC | M.Pae2982ORF33200P |
| 33205 | 94 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5140 | recombinase | |||
| ??? | M | M.PmeTTORFEP (100% identity) | CTCGAG | M.Pae2982ORF5145P |
| 5150 | R | PmeTTORFEP (100% identity) | CTCGAG | Pae2982ORF5145P |
| 5155 | 82 aa hypothetical protein | |||
| 6420 | DNA-binding protein | |||
| 6425 | M | M.PaesAG1ORF5438P (100% identity) | M.Pae2982ORF6425P | |
| 6430 | nucleoid-associated protein YejK | |||
| 20560 | 379 aa hypothetical protein | |||
| 20565 | M | M.PaesAG1ORF2662P (100% identity) | M.Pae2982ORF20565P | |
| 20570 | transposase | |||
| 22620 | 96 aa hypothetical protein | |||
| 22625 | M | M.PaesPA3ORF29655P (100% identity) | M.Pae2982ORF22625P | |
| 22630 | ABC transporter substrate-binding protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8340 | 707 aa hypothetical protein | |||
| 8345 | M | M.PspP16ORFGP (100% identity) | M.Pae2982ORF8345P | |
| 8350 | R | PspP16ORFGP (100% identity) | Pae2982ORF8345P | |
| 8355 | ATP-dependent endonuclease | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 20470 | DEAD/DEAH box helicase | |||
| 20475 | R | Pae63McrCP (100% identity) | Pae2982McrCP | |
| 20480 | AAA family ATPase | |||
| 20485 | integrase | |||
| 20490 | R | Pae63McrBP (100% identity) | Pae2982McrBP | |
| 20495 | helicase | |||