Salmonella enterica subsp. enterica serovar Saintpaul CFSAN004174 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica subsp. enterica serovar Saintpaul CFSAN004174 RM systems
Ref: Hoffmann,M. et al. unpublished
REBASE ref # 23771
| Sequence length: | GenBank #: | |
| Chromosome: | 4,777,591 bp | CP019206 |
| plasmid pCFSAN004174: | 81,410 bp | CP019207 |
REBASE acronym: Sen4174
Org_num: 22813
All begin BKQ23_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20370 | restriction endonuclease | |||
| 20375 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen4174IP |
| 20380 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen4174I |
| 20385 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen4174I |
| 20390 | 110 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1855 | cell division protein DamX | |||
| 1860 | M | M.StyTDamP (100% identity) | GATC | M.Sen4174Dam |
| 1865 | ribulose-phosphate 3-epimerase | |||
| 2360 | DUF2556 domain-containing protein | |||
| 2365 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen4174III |
| 2370 | Fis family transcriptional regulator | |||
| 9300 | phosphohydrolase | |||
| 9305 | M | M.SenWDcmP (100% identity) | CCWGG | M.Sen4174Dcm |
| 9310 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.Sen4174DcmP |
| 9315 | amino acid exporter | |||
| plasmid pCFSAN004174 | ||||
| 24210 | 73 aa hypothetical protein | |||
| 24215 | M | M.SspPIBORF23080P (100% identity) | M.Sen4174ORF24215P | |
| 24220 | 308 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17750 | cytochrome ubiquinol oxidase subunit I | |||
| 17755 | R | SenS133ORF17655P (99% identity) | CAGAG | Sen4174IIP |
| 17760 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen4174II |
| 17765 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20365 | 95 aa hypothetical protein | |||
| 20370 | R | StyUK1MrrP (100% identity) | Sen4174MrrP | |
| 20375 | type I restriction-modification system | |||