|
Putative Methylococcus capsulatus str. Bath RM systems
Ref: Ward,N. et al. PLoS Biol. 2 (10), E303 (2004)
REBASE ref # 8739
Complete sequence: 3,304,561 bp
GenBank #: AE017282 (NC_002977)
REBASE acronym: McaT
Org_num: 4003
All begin MCA
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
268 | ammonium transporter | |||
269 | M | conserved domain protein | M.McaTORF269P | |
270 | nucleotidyltransferase domain protein | |||
271 | conserved domain protein | |||
272 | S | type I restriction-modification system, S | S.McaTORF269P | |
273 | conserved domain protein | |||
833 | response regulator | |||
??? | M | M.McaBHORF4510P (82% identity) | M.McaTORF834P | |
835 | fic family protein | |||
836 | S | S.DgeDORF2017P (59% identity) | S.McaTORF834P | |
837 | 206 aa conserved hypothetical protein | |||
838 | R | DgeDORF2017P (74% identity) | McaTORF834P | |
839 | 192 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
245 | 67 aa hypothetical protein | |||
246 | M | M.McaTexORFGP (99% identity) | RGATCY | M.McaTIII |
247 | cysteine desulfurase | |||
1615 | site-specific recombinase, resolvase family | |||
1616 | M | M.Ave16549ORFCP (63% identity) | GCGCGC | M.McaTI |
1617 | R | PprDORF3855P (64% identity) | GCGCGC | McaTI |
??? | V | V.Mci1284ORF4055P (56% identity) | V.McaTIP | |
1619 | trypsin domain protein | |||
2653 | 111 aa conserved hypothetical protein | |||
2654 | M | M2.SmcB1ORF705P (78% identity) | M.McaTORF2655P | |
2655 | prophage LambdaMc01, DNA methyltransferase | |||
2654 | prophage LambdaMc01, DNA methyltransferase | |||
2655 | M | M1.RmaB10ORF15135P (91% identity) | AB | M.McaTII |
2656 | 196 aa conserved hypothetical protein | |||
2899 | endonuclease III | |||
2900 | M | M.McaI01ORF11940P (84% identity) | M.McaTORF2900P | |
2901 | 227 aa hypothetical protein | |||
3007 | 114 aa conserved hypothetical protein | |||
3008 | M | M.McaKN2ORF8260P (93% identity) | M.McaTORF3008P | |
3009 | PHP N-terminal domain protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
25 | glucose-6-phosphate 1-dehydrogenase | |||
26 | R | McaBCSORFAP (95% identity) | McaTORF29P | |
27 | ISMca5, transposase | |||
28 | nucleotidyltransferase family protein | |||
??? | M | M.McaBCSORFAP (69% identity) | M.McaTORF29P | |
31 | ISMca6, transposase, OrfA | |||
549 | RNA methyltransferase, TrmH family | |||
550 | M | M.McaMIRORF7575P (70% identity) | M.McaTORF550P | |
551 | R | McaI01ORF3790P (95% identity) | McaTORF550P | |
552 | 764 aa hypothetical protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
120 | membrane protein | |||
121 | R | McaTexMcrB2P (71% identity) | McaTMcrBP | |
122 | 326 aa conserved hypothetical protein |