Escherichia coli F-18 |
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Putative Escherichia coli F-18 RM systems
Ref: Ormsby,M.J. et al. unpublished
REBASE ref # 23332
Contig set: 5,251,079 bp
GenBank #: MLZI00000000 (NZ_MLZI00000000)
REBASE acronym: EcoF18
Org_num: 21754
All begin BKN13_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 25770 | transposase | |||
| 25775 | R | SflSTLE3ORF22785P (100% identity) | EcoF18ORF25790P | |
| 25780 | 387 aa hypothetical protein | |||
| 25785 | S | S.EcoLR72ORF18740P (100% identity) | S.EcoF18ORF25790P | |
| 25790 | M | M.SenSI167ORF3215P (100% identity) | M.EcoF18ORF25790P | |
| 25795 | transposase | |||
| 17225 | 113 aa hypothetical protein | |||
| 17230 | S | S.EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | S.EcoF18ORF17235P |
| 17235 | M | M.EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | M.EcoF18ORF17235P |
| 17240 | R | EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | EcoF18ORF17235P |
| 17245 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7705 | LexA family transcriptional regulator | |||
| 7710 | M | M.EcoY26ORF4515P (100% identity) | GATC | M.EcoF18ORF7710P |
| 7715 | 162 aa hypothetical protein | |||
| 11190 | ribulose-phosphate 3-epimerase | |||
| 11195 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoF18DamP |
| 11200 | cell division protein DamX | |||
| 19020 | TrmB family transcriptional regulator | |||
| 19025 | M | M.SsoCS14ORF10750P (100% identity) | A | M.EcoF18ORF19025P |
| 19045 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | |||
| 13665 | 121 aa hypothetical protein | |||
| 13670 | M | M.Eco973ORF11850P (99% identity) | M.EcoF18ORF13670P | |
| 13675 | 71 aa hypothetical protein | |||
| 10890 | Fis family transcriptional regulator | |||
| 10895 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoF18ORF10895P |
| 10900 | DUF2556 domain-containing protein | |||
| 7415 | 146 aa hypothetical protein | |||
| 7420 | M | M.EcosC25ORF16305P (100% identity) | M.EcoF18ORF7420P | |
| 7425 | protein ninE | |||
| 2210 | drug/metabolite exporter YedA | |||
| 2215 | V | V.EcoE51DcmP (100% identity) | V.EcoF18DcmP | |
| 2220 | M | M.EcoE51DcmP (100% identity) | CCWGG | M.EcoF18DcmP |
| 2225 | phosphohydrolase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7510 | damage-inducible protein DinI | |||
| 7515 | R | EspFAAGmrSDP (100% identity) | EcoF18GmrSDP | |
| 7520 | 163 aa hypothetical protein | |||
| 17240 | type I restriction-modification system | |||
| 17245 | R | EcosS1MrrP (100% identity) | EcoF18MrrP | |
| 17250 | GTPase | |||