Escherichia coli GN1225 |
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Putative Escherichia coli GN1225 RM systems
Ref: Carbonari,C.C. and Rivas,M. unpublished
REBASE ref # 23121
Contig set: 5,416,624 bp
GenBank #: LXIT00000000 (NZ_LXIT00000000)
REBASE acronym: Eco1225
Org_num: 21423
All begin ORF_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2012 | 82 aa hypothetical protein | |||
| 2013 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco1225ORFCP |
| 2016 | M | M.EcoPT54II (100% identity) | CACNNNNNNNCTGG | M.Eco1225ORFCP |
| 2018 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco1225ORFCP |
| 2020 | 113 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1 | M | DNA adenine methylase, partial | M.Eco1225ORFJP | |
| 6 | 74 aa hypothetical protein | |||
| 2 | 116 aa hypothetical protein ACU67_25215 | |||
| 3 | M | M.EcosPA8ORF27255P (99% identity) | M.Eco1225ORFLP | |
| 8 | 116 aa hypothetical protein | |||
| ??? | M | M.Ecos1613ORF25555P (100% identity) | M.Eco1225ORFAP | |
| 15 | 90 aa hypothetical protein | |||
| 21 | 64 aa hypothetical protein | |||
| ??? | M | M.EcoC3108ORFMP (95% identity) | GATC | M.Eco1225ORFEP |
| 27 | NinB | |||
| 36 | 73 aa hypothetical protein | |||
| 38 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco1225ORFKP | |
| 41 | 101 aa hypothetical protein | |||
| 27 | 95 aa hypothetical protein AU083_gp23 | |||
| 28 | M | M.EcoSH3ORF25410P (100% identity) | CTGCAG | M.Eco1225ORFIP |
| 30 | R | Sso1099IP (100% identity) | CTGCAG | Eco1225ORFIP |
| 31 | 65 aa hypothetical protein | |||
| 30 | phosphohydrolase | |||
| 31 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco1225DcmP |
| 33 | V | V.EcoPT54DcmP (100% identity) | V.Eco1225DcmP | |
| 37 | drug/metabolite exporter YedA | |||
| 278 | 103 aa hypothetical protein HMPREF9348_04549 | |||
| 282 | M | M.EcoXJ51ORF23305P (100% identity) | M.Eco1225ORFGP | |
| 284 | 73 aa hypothetical protein | |||
| 318 | Fis family transcriptional regulator | |||
| 319 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco1225ORFDP |
| 320 | membrane protein | |||
| 391 | 148 aa hypothetical protein | |||
| 394 | M | DNA adenine methylase | M.Eco1225ORFFP | |
| 398 | 106 aa hypothetical protein | |||
| 681 | cell division protein DamX | |||
| 684 | M | DamMyc-Pc | GATC | M.Eco1225DamP |
| 686 | ribulose-phosphate 3-epimerase | |||
| 2141 | 138 aa hypothetical protein | |||
| 2142 | RM | EcosPA8ORF17390P (99% identity) | GAAABCC | Eco1225ORFBP |
| 2150 | helicase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2023 | 81 aa hypothetical protein Ec53638_1442 | |||
| 2024 | R | EcoX21GmrDP (100% identity) | Eco1225GmrDP | |
| 2025 | 293 aa hypothetical protein | |||