Escherichia coli GN1214 |
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Putative Escherichia coli GN1214 RM systems
Ref: Carbonari,C.C. and Rivas,M. unpublished
REBASE ref # 23121
Contig set: 5,361,881 bp
GenBank #: LXJE00000000 (NZ_LXJE00000000)
REBASE acronym: Eco1214
Org_num: 21435
All begin ORF_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 797 | 113 aa hypothetical protein | |||
| 800 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco1214ORFBP |
| 802 | M | M.EcoPT54II (100% identity) | CACNNNNNNNCTGG | M.Eco1214ORFBP |
| 804 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco1214ORFBP |
| 807 | 82 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7 | 116 aa hypothetical protein | |||
| ??? | M | M.Ecos1613ORF25555P (100% identity) | M.Eco1214ORFAP | |
| 14 | 90 aa hypothetical protein | |||
| 7 | 66 aa hypothetical protein BY68_22700 | |||
| 8 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco1214ORFHP | |
| 11 | 104 aa unknown protein encoded by prophage CP-933O | |||
| 12 | 101 aa hypothetical protein | |||
| 14 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco1214ORFFP | |
| 17 | 73 aa hypothetical protein | |||
| 23 | 76 aa hypothetical protein | |||
| 26 | M | M.EspP079ORF2847P (100% identity) | GATC | M.Eco1214ORFEP |
| 30 | 128 aa hypothetical protein | |||
| 33 | recombination protein ninB | |||
| 36 | M | M.Eph213ORF61P (96% identity) | GATC | M.Eco1214ORFGP |
| 27 | membrane protein | |||
| 28 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco1214ORFDP |
| 29 | Fis family transcriptional regulator | |||
| 172 | drug/metabolite exporter YedA | |||
| 174 | V | V.EcoPT54DcmP (100% identity) | V.Eco1214DcmP | |
| 177 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco1214DcmP |
| 179 | phosphohydrolase | |||
| 667 | helicase | |||
| 669 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco1214ORFCP |
| 678 | 138 aa hypothetical protein | |||
| 683 | cell division protein DamX | |||
| 686 | M | DamMyc-Pc | GATC | M.Eco1214DamP |
| 688 | ribulose-phosphate 3-epimerase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 794 | 293 aa hypothetical protein | |||
| 795 | R | EcoX21GmrDP (100% identity) | Eco1214GmrDP | |
| 796 | 81 aa hypothetical protein Ec53638_1442 | |||