Bifidobacterium bifidum MJR8628B |
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Putative Bifidobacterium bifidum MJR8628B RM systems
Ref: Mitreva,M. et al. unpublished
REBASE ref # 22836
Contig set: 2,259,348 bp
GenBank #: LRPO00000000 (NZ_LRPO00000000)
REBASE acronym: Bbi8628B
Org_num: 21448
All begin HMPREF3196_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 230 | S | S1.PmeBin303ORFGP (41% identity) | S.Bbi8628BORF230P | |
| 176 | M | M.Bbi29521ORF616P (99% identity) | M.Bbi8628BORF176P | |
| 178 | 280 aa hypothetical protein | |||
| 177 | S | S2.Blo10068IP (74% identity) | S.Bbi8628BORF176P | |
| 180 | 51 aa hypothetical protein | |||
| 166 | 481 aa hypothetical protein | |||
| 167 | M | M.Bbi29521ORF182P (100% identity) | M.Bbi8628BORF167P | |
| 168 | 165 aa hypothetical protein | |||
| ??? | S | S.Bbi29521ORF182P (100% identity) | S.Bbi8628BORF167P | |
| 170 | Abi-like protein | |||
| 171 | R | Bbi29521ORF182P (100% identity) | Bbi8628BORF167P | |
| 172 | 49 aa hypothetical protein | |||
| 1796 | argininosuccinate lyase | |||
| 1797 | R | PmeBin303ORFGP (95% identity) | Bbi8628BORF1797P | |
| 1798 | divergent AAA domain protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1892 | 139 aa hypothetical protein | |||
| 1893 | R | BkaPV202ORF9960P (48% identity) | GGNCC | Bbi8628BORF1894P |
| 1894 | M | M.GvaB482ORF3006P (60% identity) | GGNCC | M.Bbi8628BORF1894P |
| 1895 | 52 aa hypothetical protein | |||
| 2158 | 70 aa hypothetical protein | |||
| 2159 | RM | Bbi2010ORF859P (99% identity) | Bbi8628BORF2159P | |
| 2160 | 107 aa hypothetical protein | |||
| 283 | DNA-binding helix-turn-helix protein | |||
| 284 | M | M.Bbi3115ORF2510P (100% identity) | M.Bbi8628BORF284P | |
| 285 | 149 aa hypothetical protein | |||
| 1553 | beta-galactosidase trimerization domain protein | |||
| ??? | R | BbiDORFBP (100% identity) | GGCGCC | Bbi8628BORF1554P |
| 1556 | 150 aa hypothetical protein | |||
| 528 | 40 aa hypothetical protein | |||
| 529 | R | BbiBF3ORF626P (99% identity) | Bbi8628BORF529P | |
| 530 | 41 aa hypothetical protein | |||
| 691 | site-specific recombinase, phage integrase | |||
| ??? | M | M.BbiBGN4ORF672P (100% identity) | CTCGAG | M.Bbi8628BORF693P |
| 694 | R | PmeBin303ORFDP (100% identity) | CTCGAG | Bbi8628BORF693P |
| 695 | 290 aa hypothetical protein | |||