Salmonella enterica subsp. enterica serovar Typhimurium CFSAN033932 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium CFSAN033932 RM systems
Ref: Timme,R. et al. unpublished
REBASE ref # 22799
Contig set: 4,864,341 bp
GenBank #: LUHW00000000 (NZ_LUHW00000000)
REBASE acronym: Sen33932
Org_num: 21378
All begin AF342_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 20410 | restriction endonuclease | |||
| 20415 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen33932ORF20420P |
| 20420 | M | M.StyUK1II (100% identity) | GAGNNNNNNRTAYG | M.Sen33932ORF20420P |
| 20425 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen33932ORF20420P |
| 20430 | 110 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 15455 | ribulose phosphate epimerase | |||
| 15460 | M | M.StyTDamP (100% identity) | GATC | M.Sen33932DamP |
| 15465 | cell division protein DamX | |||
| 17415 | DNA repair protein | |||
| 17420 | RM | SenSTm9ORF21385P (99% identity) | GATCAG | Sen33932ORF17420P |
| 17425 | 363 aa hypothetical protein | |||
| 18375 | 54 aa hypothetical protein | |||
| 18380 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen33932ORF18380P |
| 18385 | Fis family transcriptional regulator | |||
| 15925 | multidrug DMT transporter | |||
| 15930 | V | V.StyUK1DcmP (100% identity) | V.Sen33932DcmP | |
| 15935 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen33932DcmP |
| 15940 | hydrolase | |||
| 12190 | 98 aa hypothetical protein | |||
| 12195 | M | M.SenBR032ORFBP (100% identity) | GATC | M.Sen33932ORF12195P |
| 12200 | endonuclease | |||
| 10580 | 62 aa hypothetical protein | |||
| 10585 | M | M.StyUK1ORFAP (100% identity) | M.Sen33932ORF10585P | |
| 10590 | 73 aa hypothetical protein | |||
| 6700 | 160 aa hypothetical protein | |||
| 6705 | M | M.StyUK1V (100% identity) | GATC | M.Sen33932ORF6705P |
| 6710 | crossover junction endodeoxyribonuclease | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1280 | 33 aa hypothetical protein | |||
| 1285 | R | StyUK1IP (99% identity) | CAGAG | Sen33932ORF1290P |
| 1290 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen33932ORF1290P |
| 1295 | sugar transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 20405 | 95 aa hypothetical protein | |||
| 20410 | R | StyUK1MrrP (100% identity) | Sen33932MrrP | |
| 20415 | DEAD/DEAH box helicase | |||