Salmonella enterica subsp. enterica serovar Typhimurium CFSAN033922 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium CFSAN033922 RM systems
Ref: Timme,R. et al. unpublished
REBASE ref # 22799
Contig set: 4,843,468 bp
GenBank #: LUIC00000000 (NZ_LUIC00000000)
REBASE acronym: Sen33922
Org_num: 21371
All begin AF380_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 19730 | restriction endonuclease | |||
| 19735 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen33922ORF19740P |
| 19740 | M | M.StyUK1II (100% identity) | GAGNNNNNNRTAYG | M.Sen33922ORF19740P |
| 19745 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen33922ORF19740P |
| 19750 | 110 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 18890 | RM | 147 aa hypothetical protein | GATCAG | Sen33922ORF18890P |
| 18895 | 363 aa hypothetical protein | |||
| 21580 | RM | StyUK1IV (88% identity) | GATCAG | Sen33922ORF21580P |
| 21585 | DNA repair protein | |||
| 23220 | 221 aa hypothetical protein | |||
| 23225 | M | M.Sens29958ORF6205P (100% identity) | M.Sen33922ORF23225P | |
| 23230 | 217 aa hypothetical protein | |||
| 16775 | 54 aa hypothetical protein | |||
| 16780 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen33922ORF16780P |
| 16785 | Fis family transcriptional regulator | |||
| 14590 | multidrug DMT transporter | |||
| 14595 | V | V.StyUK1DcmP (100% identity) | V.Sen33922DcmP | |
| 14600 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen33922DcmP |
| 14605 | hydrolase | |||
| 16720 | 160 aa hypothetical protein | |||
| 16725 | M | M.StyUK1V (100% identity) | GATC | M.Sen33922ORF16725P |
| 16730 | crossover junction endodeoxyribonuclease | |||
| 14790 | cell division protein DamX | |||
| 14795 | M | M.StyTDamP (100% identity) | GATC | M.Sen33922DamP |
| 14800 | ribulose phosphate epimerase | |||
| 12255 | 62 aa hypothetical protein | |||
| 12260 | M | M.StyUK1ORFAP (100% identity) | M.Sen33922ORF12260P | |
| 12265 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 680 | 33 aa hypothetical protein | |||
| 685 | R | StyUK1IP (99% identity) | CAGAG | Sen33922ORF690P |
| 690 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen33922ORF690P |
| 695 | sugar transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 19725 | 95 aa hypothetical protein | |||
| 19730 | R | StyUK1MrrP (100% identity) | Sen33922MrrP | |
| 19735 | DEAD/DEAH box helicase | |||