Salmonella enterica subsp. enterica serovar Typhimurium CFSAN033898 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium CFSAN033898 RM systems
Ref: Timme,R. et al. unpublished
REBASE ref # 22799
Contig set: 5,044,466 bp
GenBank #: LUIV00000000 (NZ_LUIV00000000)
REBASE acronym: Sen33898
Org_num: 21364
All begin AF370_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 21355 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen33898ORF21360P |
| 21360 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen33898ORF21360P |
| 21365 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen33898ORF21360P |
| 21370 | 110 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 18630 | RM | type II restriction endonuclease | GATCAG | Sen33898ORF18630P |
| 18635 | DNA repair protein | |||
| 21720 | RM | type II restriction endonuclease | GATCAG | Sen33898ORF21720P |
| 21725 | 363 aa hypothetical protein | |||
| 24055 | 217 aa hypothetical protein | |||
| 24060 | M | M.Sens29958ORF6205P (100% identity) | M.Sen33898ORF24060P | |
| 24065 | 221 aa hypothetical protein | |||
| 16210 | ribulose phosphate epimerase | |||
| 16215 | M | M.StyTDamP (100% identity) | GATC | M.Sen33898DamP |
| 16220 | cell division protein DamX | |||
| 15490 | nuclease | |||
| 15495 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.Sen33898ORF15495P |
| 15500 | 55 aa hypothetical protein | |||
| 23005 | 73 aa hypothetical protein | |||
| 23010 | M | M.UbapRSB107ORFAP (100% identity) | M.Sen33898ORF23010P | |
| 23015 | 308 aa hypothetical protein | |||
| 19050 | 277 aa hypothetical protein | |||
| 19055 | M | M.YpsF1ORFDP (100% identity) | M1.Sen33898ORF19055P | |
| 19060 | DNA-binding protein | |||
| 19285 | 202 aa hypothetical protein | |||
| 19290 | M | M.YpsF1ORFBP (100% identity) | M.Sen33898ORF19290P | |
| 19295 | 108 aa hypothetical protein | |||
| 17080 | Fis family transcriptional regulator | |||
| 17085 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen33898ORF17085P |
| 17090 | 54 aa hypothetical protein | |||
| 5895 | hydrolase | |||
| 5900 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen33898DcmP |
| 5905 | V | V.StyUK1DcmP (100% identity) | V.Sen33898DcmP | |
| 5910 | multidrug DMT transporter | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2945 | 33 aa hypothetical protein | |||
| 2950 | R | StyUK1IP (99% identity) | CAGAG | Sen33898ORF2955P |
| 2955 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen33898ORF2955P |
| 2960 | sugar transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 24295 | 95 aa hypothetical protein | |||
| 24300 | R | StyUK1MrrP (100% identity) | Sen33898Mrr2P | |