Salmonella enterica subsp. enterica serovar Typhimurium CFSAN033890 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium CFSAN033890 RM systems
Ref: Timme,R. et al. unpublished
REBASE ref # 22799
Contig set: 5,012,771 bp
GenBank #: LVFV00000000 (NZ_LVFV00000000)
REBASE acronym: Sen33890
Org_num: 21357
All begin AF394_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 12215 | 110 aa hypothetical protein | |||
| 12220 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen33890ORF12225P |
| 12225 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen33890ORF12225P |
| 12230 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen33890ORF12225P |
| 12235 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 23945 | 217 aa hypothetical protein | |||
| 23950 | M | M.Sens29958ORF6205P (100% identity) | M.Sen33890ORF23950P | |
| 23955 | 221 aa hypothetical protein | |||
| 20 | ribulose phosphate epimerase | |||
| 25 | M | M.StyTDamP (100% identity) | GATC | M.Sen33890DamP |
| 30 | cell division protein DamX | |||
| 23695 | 202 aa hypothetical protein | |||
| 23700 | M | M.YpsF1ORFBP (100% identity) | M.Sen33890ORF23700P | |
| 23705 | 108 aa hypothetical protein | |||
| 21165 | 54 aa hypothetical protein | |||
| 21170 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen33890ORF21170P |
| 21175 | Fis family transcriptional regulator | |||
| 14340 | DNA-binding protein | |||
| 14345 | M | M.YpsF1ORFDP (100% identity) | M2.Sen33890ORF14335P | |
| 14350 | 277 aa hypothetical protein | |||
| 21105 | 55 aa hypothetical protein | |||
| 21110 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.Sen33890ORF21110P |
| 21115 | nuclease | |||
| 12055 | 363 aa hypothetical protein | |||
| 12060 | RM | StyUK1IV (100% identity) | GATCAG | Sen33890ORF12060P |
| 12065 | DNA repair protein | |||
| 8345 | hydrolase | |||
| 8350 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen33890DcmP |
| 8355 | V | V.StyUK1DcmP (100% identity) | V.Sen33890DcmP | |
| 8360 | multidrug DMT transporter | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3260 | 33 aa hypothetical protein | |||
| 3265 | R | StyUK1IP (99% identity) | CAGAG | Sen33890ORF3270P |
| 3270 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen33890ORF3270P |
| 3275 | sugar transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 12230 | DEAD/DEAH box helicase | |||
| 12235 | R | StyUK1MrrP (100% identity) | Sen33890MrrP | |
| 12240 | 95 aa hypothetical protein | |||