Salmonella enterica subsp. enterica serovar Typhimurium CFSAN033885 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium CFSAN033885 RM systems
Ref: Timme,R. et al. unpublished
REBASE ref # 22799
Contig set: 4,912,039 bp
GenBank #: LUJC00000000 (NZ_LUJC00000000)
REBASE acronym: Sen33885
Org_num: 21351
All begin AF388_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 19620 | 110 aa hypothetical protein | |||
| 19625 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen33885ORF19630P |
| 19630 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen33885ORF19630P |
| 19635 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen33885ORF19630P |
| 19640 | restriction endonuclease | |||
| 13285 | restriction endonuclease subunit S | |||
| 13290 | M | M.Cfr101I (99% identity) | M.Sen33885ORF13290P | |
| 13295 | S | S.Cfr101I (98% identity) | S.Sen33885ORF13290P | |
| 13300 | 96 aa hypothetical protein | |||
| 13305 | R | CbrSOC07ORF19810P (99% identity) | Sen33885ORF13290P | |
| 13310 | metal-dependent hydrolase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 23705 | pseudogene | |||
| 23710 | M | M.StyTORF1914P (100% identity) | M.Sen33885ORF23710P | |
| 23715 | 110 aa hypothetical protein | |||
| 14900 | ribulose phosphate epimerase | |||
| 14905 | M | M.StyTDamP (100% identity) | GATC | M.Sen33885DamP |
| 14910 | cell division protein DamX | |||
| 22165 | Fis family transcriptional regulator | |||
| 22170 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen33885ORF22170P |
| 22175 | 54 aa hypothetical protein | |||
| 4640 | multidrug DMT transporter | |||
| 4645 | V | V.StyUK1DcmP (100% identity) | V.Sen33885DcmP | |
| 4650 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen33885DcmP |
| 4655 | hydrolase | |||
| 19460 | 363 aa hypothetical protein | |||
| 19465 | RM | StyUK1IV (100% identity) | GATCAG | Sen33885ORF19465P |
| 19470 | DNA repair protein | |||
| 21235 | 62 aa hypothetical protein | |||
| 21240 | M | M.StyUK1ORFAP (100% identity) | M.Sen33885ORF21240P | |
| 21245 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4295 | 33 aa hypothetical protein | |||
| 4300 | R | StyUK1IP (99% identity) | CAGAG | Sen33885ORF4305P |
| 4305 | M | M.Sens29958ORF17880P (99% identity) | CAGAG | M.Sen33885ORF4305P |
| 4310 | sugar transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 19635 | DEAD/DEAH box helicase | |||
| 19640 | R | StyUK1MrrP (100% identity) | Sen33885Mrr4P | |
| 19645 | 95 aa hypothetical protein | |||
| 13310 | metal-dependent hydrolase | |||
| 13315 | R | CspXT122MrrP (100% identity) | Sen33885MrrP | |
| 13320 | 74 aa hypothetical protein | |||