Salmonella enterica subsp. enterica serovar Typhimurium CFSAN033884 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium CFSAN033884 RM systems
Ref: Timme,R. et al. unpublished
REBASE ref # 22799
Contig set: 4,839,700 bp
GenBank #: LVFX00000000 (NZ_LVFX00000000)
REBASE acronym: Sen33884
Org_num: 21350
All begin AF385_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 6905 | 110 aa hypothetical protein | |||
| 6910 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen33884ORF6915P |
| 6915 | M | M.StyUK1II (100% identity) | GAGNNNNNNRTAYG | M.Sen33884ORF6915P |
| 6920 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen33884ORF6915P |
| 6925 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7075 | ribulose phosphate epimerase | |||
| 7080 | M | M.StyTDamP (100% identity) | GATC | M.Sen33884DamP |
| 7085 | cell division protein DamX | |||
| 21815 | 54 aa hypothetical protein | |||
| 21820 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen33884ORF21820P |
| 21825 | Fis family transcriptional regulator | |||
| 22155 | multidrug DMT transporter | |||
| 22160 | V | V.StyUK1DcmP (100% identity) | V.Sen33884DcmP | |
| 22165 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen33884DcmP |
| 22170 | hydrolase | |||
| 18590 | 75 aa hypothetical protein | |||
| 18595 | M | M.SenZM9ORFAP (100% identity) | GATC | M.Sen33884ORF18595P |
| 18600 | endonuclease | |||
| 20000 | 62 aa hypothetical protein | |||
| 20005 | M | M.StyUK1ORFAP (100% identity) | M.Sen33884ORF20005P | |
| 20010 | 73 aa hypothetical protein | |||
| 13280 | 160 aa hypothetical protein | |||
| 13285 | M | M.StyUK1V (100% identity) | GATC | M.Sen33884ORF13285P |
| 13290 | crossover junction endodeoxyribonuclease | |||
| 6745 | 363 aa hypothetical protein | |||
| 6750 | RM | StyUK1IV (100% identity) | GATCAG | Sen33884ORF6750P |
| 6755 | DNA repair protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4970 | 33 aa hypothetical protein | |||
| 4975 | R | StyUK1IP (99% identity) | CAGAG | Sen33884ORF4980P |
| 4980 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen33884ORF4980P |
| 4985 | sugar transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6920 | DEAD/DEAH box helicase | |||
| 6925 | R | StyUK1MrrP (100% identity) | Sen33884MrrP | |
| 6930 | 95 aa hypothetical protein | |||