Salmonella enterica subsp. enterica serovar Typhimurium CFSAN033877 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica subsp. enterica serovar Typhimurium CFSAN033877 RM systems
Ref: Timme,R. et al. unpublished
REBASE ref # 22799
Contig set: 4,887,506 bp
GenBank #: LVGD00000000 (NZ_LVGD00000000)
REBASE acronym: Sen33877
Org_num: 21345
All begin AIZ22_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 6255 | restriction endonuclease | |||
| 6260 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen33877ORF6265P |
| 6265 | M | M.StyUK1II (100% identity) | GAGNNNNNNRTAYG | M.Sen33877ORF6265P |
| 6270 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen33877ORF6265P |
| 6275 | 110 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7610 | crossover junction endodeoxyribonuclease | |||
| 7615 | M | M.StyUK1V (100% identity) | GATC | M.Sen33877ORF7615P |
| 7620 | 160 aa hypothetical protein | |||
| 18880 | 73 aa hypothetical protein | |||
| 18885 | M | M.StyUK1ORFAP (100% identity) | M.Sen33877ORF18885P | |
| 18890 | 62 aa hypothetical protein | |||
| 22760 | multidrug DMT transporter | |||
| 22765 | V | V.StyUK1DcmP (100% identity) | V.Sen33877DcmP | |
| 22770 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen33877DcmP |
| 22775 | hydrolase | |||
| 22555 | Fis family transcriptional regulator | |||
| 22560 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen33877ORF22560P |
| 22565 | 54 aa hypothetical protein | |||
| 17810 | 75 aa hypothetical protein | |||
| 17815 | M | M.SenZM9ORFAP (100% identity) | GATC | M.Sen33877ORF17815P |
| 17820 | endonuclease | |||
| 6425 | DNA repair protein | |||
| 6430 | RM | StyUK1IV (100% identity) | GATCAG | Sen33877ORF6430P |
| 6435 | 363 aa hypothetical protein | |||
| 4350 | cell division protein DamX | |||
| 4355 | M | M.StyTDamP (100% identity) | GATC | M.Sen33877DamP |
| 4360 | ribulose phosphate epimerase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5945 | 33 aa hypothetical protein | |||
| 5950 | R | StyUK1IP (99% identity) | CAGAG | Sen33877ORF5955P |
| 5955 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen33877ORF5955P |
| 5960 | sugar transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6250 | 95 aa hypothetical protein | |||
| 6255 | R | StyUK1MrrP (100% identity) | Sen33877MrrP | |
| 6260 | DEAD/DEAH box helicase | |||