Salmonella enterica subsp. enterica serovar Typhimurium CFSAN033852 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium CFSAN033852 RM systems
Ref: Timme,R. et al. unpublished
REBASE ref # 22799
Contig set: 5,094,809 bp
GenBank #: LVGY00000000 (NZ_LVGY00000000)
REBASE acronym: Sen33852
Org_num: 21339
All begin AIY97_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4565 | restriction endonuclease | |||
| 4570 | R | StyLT2IIP (100% identity) | GAGNNNNNNRTAYG | Sen33852ORF4575P |
| 4575 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen33852ORF4575P |
| 4580 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen33852ORF4575P |
| 4585 | 110 aa hypothetical protein | |||
| 15535 | 540 aa hypothetical protein | |||
| 15540 | S | S.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | S.Sen33852ORF15545P |
| 15545 | M | M.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | M.Sen33852ORF15545P |
| 15550 | R | Sen33866ORF23510P (100% identity) | TGANNNNNNCTTC | Sen33852ORF15545P |
| 15555 | transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 24690 | 82 aa hypothetical protein, partial | |||
| 24695 | M | M.Ssp15303ORFAP (100% identity) | M.Sen33852ORF24695P | |
| 24700 | 149 aa hypothetical protein | |||
| 3150 | crossover junction endodeoxyribonuclease | |||
| ??? | M | M.Ssp17155ORFIP (100% identity) | GATC | M.Sen33852ORF3155P |
| 3160 | 157 aa hypothetical protein | |||
| 20 | ribulose phosphate epimerase | |||
| 25 | M | M.StyTDamP (100% identity) | GATC | M.Sen33852DamP |
| 30 | cell division protein DamX | |||
| 24485 | 146 aa hypothetical protein | |||
| 24490 | M | M.Sen7563ORF16315P (100% identity) | GATC | M.Sen33852ORF24490P |
| 24495 | 72 aa hypothetical protein | |||
| 19760 | 54 aa hypothetical protein | |||
| 19765 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen33852ORF19765P |
| 19770 | Fis family transcriptional regulator | |||
| 22155 | 73 aa hypothetical protein | |||
| 22160 | M | M.StyUK1ORFAP (100% identity) | M.Sen33852ORF22160P | |
| 22165 | 62 aa hypothetical protein | |||
| 21775 | 79 aa hypothetical protein | |||
| 21780 | M | M.SspsA7ORF8410P (100% identity) | GATC | M.Sen33852ORF21780P |
| 21785 | exonuclease | |||
| 20765 | multidrug DMT transporter | |||
| 20770 | V | V.StyUK1DcmP (100% identity) | V.Sen33852DcmP | |
| 20775 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen33852DcmP |
| 20780 | hydrolase | |||
| 4735 | DNA repair protein | |||
| 4740 | RM | StyUK1IV (100% identity) | GATCAG | Sen33852ORF4740P |
| 4745 | 363 aa hypothetical protein | |||
| 15980 | 207 aa hypothetical protein | |||
| 15985 | M | M.Sen33866ORF7530P (100% identity) | GATC | M.Sen33852ORF15985P |
| 15990 | 59 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 18555 | pseudogene | |||
| 18560 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen33852ORF18560P |
| 18565 | R | StyUK1IP (99% identity) | CAGAG | Sen33852ORF18560P |
| 18570 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4560 | 95 aa hypothetical protein | |||
| 4565 | R | StyUK1MrrP (100% identity) | Sen33852MrrP | |
| 4570 | DEAD/DEAH box helicase | |||