Salmonella enterica subsp. enterica serovar Typhimurium STy03 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium STy03 RM systems
Ref: Ronholm,J. et al. unpublished
REBASE ref # 22795
Contig set: 4,808,325 bp
GenBank #: MATL00000000 (NZ_MATL00000000)
REBASE acronym: SenSTy03
Org_num: 21382
All begin BBC57_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 13155 | 110 aa hypothetical protein | |||
| 13160 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.SenSTy03ORF13165P |
| 13165 | M | M.StyUK1II (100% identity) | GAGNNNNNNRTAYG | M.SenSTy03ORF13165P |
| 13170 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | SenSTy03ORF13165P |
| 13175 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6555 | ribulose-phosphate 3-epimerase | |||
| 6560 | M | M.StyTDamP (100% identity) | GATC | M.SenSTy03DamP |
| 6565 | cell division protein DamX | |||
| 18745 | 70 aa hypothetical protein | |||
| 18750 | M | M.StyTORF1914P (100% identity) | M.SenSTy03ORF18750P | |
| 18755 | 110 aa hypothetical protein | |||
| 18525 | 160 aa hypothetical protein | |||
| 18530 | M | M.StyUK1V (100% identity) | GATC | M.SenSTy03ORF18530P |
| 18535 | crossover junction endodeoxyribonuclease | |||
| 160 | drug/metabolite exporter YedA | |||
| 165 | V | V.Sen6005DcmP (100% identity) | CCWGG | V.SenSTy03DcmP |
| 170 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.SenSTy03DcmP |
| 175 | phosphohydrolase | |||
| 6485 | Fis family transcriptional regulator | |||
| 6490 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenSTy03ORF6490P |
| 6495 | DUF2556 domain-containing protein | |||
| 12995 | 363 aa hypothetical protein | |||
| 13000 | RM | StyUK1IV (100% identity) | GATCAG | SenSTy03ORF13000P |
| 13005 | DNA repair protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10310 | 33 aa hypothetical protein | |||
| 10315 | R | StyUK1IP (99% identity) | CAGAG | SenSTy03ORF10320P |
| 10320 | M | M.StyUK1I (100% identity) | CAGAG | M.SenSTy03ORF10320P |
| 10325 | sugar transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 13170 | type I restriction-modification system | |||
| 13175 | R | StyUK1MrrP (100% identity) | SenSTy03MrrP | |
| 13180 | 95 aa hypothetical protein | |||