Salmonella enterica subsp. enterica serovar Typhimurium STy02 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium STy02 RM systems
Ref: Ronholm,J. et al. unpublished
REBASE ref # 22795
Contig set: 4,808,032 bp
GenBank #: MATK00000000 (NZ_MATK00000000)
REBASE acronym: SenSty02
Org_num: 21381
All begin BBC56_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 12650 | 110 aa hypothetical protein | |||
| 12655 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.SenSty02ORF12660P |
| 12660 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.SenSty02ORF12660P |
| 12665 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | SenSty02ORF12660P |
| 12670 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7730 | ribulose-phosphate 3-epimerase | |||
| 7735 | M | M.StyTDamP (100% identity) | GATC | M.SenSty02DamP |
| 7740 | cell division protein DamX | |||
| 17490 | phosphohydrolase | |||
| 17495 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.SenSty02DcmP |
| 17500 | V | V.StyUK1DcmP (100% identity) | V.SenSty02DcmP | |
| 17505 | drug/metabolite exporter YedA | |||
| 21530 | Fis family transcriptional regulator | |||
| 21535 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenSty02ORF21535P |
| 21540 | DUF2556 domain-containing protein | |||
| 12490 | 363 aa hypothetical protein | |||
| 12495 | RM | StyUK1IV (100% identity) | GATCAG | SenSty02ORF12495P |
| 12500 | DNA repair protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1735 | 33 aa hypothetical protein | |||
| 1740 | R | StyUK1IP (99% identity) | CAGAG | SenSty02ORF1745P |
| 1745 | M | M.StyUK1I (100% identity) | CAGAG | M.SenSty02ORF1745P |
| 1750 | sugar transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 12665 | type I restriction-modification system | |||
| 12670 | R | StyUK1MrrP (100% identity) | SenSty02MrrP | |
| 12675 | 95 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 19210 | DNA polymerase III subunit epsilon | |||
| 19215 | M | M.Sens24219ORF5575P (100% identity) | GATC | M.SenSty02ORF19215P |
| 19220 | endonuclease | |||