Salmonella enterica subsp. enterica serovar Thompson STh02 |
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Putative Salmonella enterica subsp. enterica serovar Thompson STh02 RM systems
Ref: Ronholm,J. et al. unpublished
REBASE ref # 22795
Contig set: 4,752,155 bp
GenBank #: MATI00000000 (NZ_MATI00000000)
REBASE acronym: SenSth02
Org_num: 21335
All begin BBC54_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 8085 | 106 aa hypothetical protein | |||
| 8090 | S | S.Spy5740I (99% identity) | AGANNNNNNNNCTGG | S.SenSth02ORF8095P |
| 8095 | M | M.Spy5740I (100% identity) | AGANNNNNNNNCTGG | M.SenSth02ORF8095P |
| 8100 | R | Spy5740IP (100% identity) | AGANNNNNNNNCTGG | SenSth02ORF8095P |
| 8105 | 322 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 445 | DUF2556 domain-containing protein | |||
| 450 | M | M.SenThORF2290P (100% identity) | ATGCAT | M.SenSth02ORF450P |
| 455 | Fis family transcriptional regulator | |||
| 11635 | 77 aa hypothetical protein | |||
| 11640 | M | M.SensSZL38ORF19965P (100% identity) | GATC | M.SenSth02ORF11640P |
| 11645 | replication protein A | |||
| 15615 | phosphohydrolase | |||
| 15620 | M | M.SspZ54DcmP (100% identity) | CCWGG | M.SenSth02DcmP |
| 15625 | V | V.StyUK1DcmP (100% identity) | V.SenSth02DcmP | |
| 15630 | drug/metabolite exporter YedA | |||
| 7930 | 202 aa hypothetical protein | |||
| 7935 | M | M.Spy5740IV (100% identity) | GGTACC | M.SenSth02ORF7935P |
| 7940 | R | Spy5740IVP (100% identity) | GGTACC | SenSth02ORF7935P |
| 7945 | 239 aa hypothetical protein | |||
| 5620 | cell division protein DamX | |||
| 5625 | M | M.StyTDamP (100% identity) | GATC | M.SenSth02DamP |
| 5630 | ribulose-phosphate 3-epimerase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 22005 | sugar transporter | |||
| 22010 | M | M.Spy5740II (100% identity) | CAGAG | M.SenSth02ORF22010P |
| ??? | R | Ssp15303ORFGP (99% identity) | CAGAG | SenSth02ORF22010P |
| 22020 | 33 aa hypothetical protein | |||