Clostridioides difficile CD8-15 |
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Putative Clostridioides difficile CD8-15 RM systems
Ref: Riccobono,E. et al. unpublished
REBASE ref # 22759
Contig set: 4,249,791 bp
GenBank #: LYDP00000000 (NZ_LYDP00000000)
REBASE acronym: Cdi815
Org_num: 21522
All begin cdgr_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4920 | tagatose-bisphosphate aldolase | |||
| 4925 | M | M.Pdi6602ORF710241P (100% identity) | GCAYNNNNNNTTC | M.Cdi815ORF4925P |
| 4930 | S | S.Pdi6602ORF710241P (100% identity) | GCAYNNNNNNTTC | S.Cdi815ORF4925P |
| 4935 | 102 aa hypothetical protein | |||
| 4940 | nucleotidyltransferase | |||
| 4945 | 142 aa hypothetical protein | |||
| ??? | R | Cdi1118ORFAP (100% identity) | GCAYNNNNNNTTC | Cdi815ORF4925P |
| 4955 | 687 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7055 | peptidase M23 | |||
| 7060 | M | M.RbrL2ORF950P (100% identity) | CCSSGG | M.Cdi815ORF7060P |
| 7065 | conjugal transfer protein TraE | |||
| 7070 | conjugal transfer protein | |||
| 7075 | M | M.RbrL2ORF920P (100% identity) | GATC | M.Cdi815ORF7075P |
| 7080 | 283 aa hypothetical protein | |||
| 6225 | Rrf2 family transcriptional regulator | |||
| 6230 | M | M.CdiRSS3ORF14215P (100% identity) | CAAAAA | M.Cdi815ORF6230P |
| 6235 | phospholipase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3480 | cell division protein | |||
| 3485 | R | CdiEW52McrBP (100% identity) | Cdi815McrBP | |
| 3490 | R | Pdi630McrCP (100% identity) | Cdi815McrCP | |
| 3495 | AAA family ATPase | |||