Salmonella enterica subsp. enterica serovar Virchow SL491 |
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Putative Salmonella enterica subsp. enterica serovar Virchow SL491 RM systems
Ref: Ravel,J. et al. unpublished
REBASE ref # 13961
Contig set: 4,867,829 bp
GenBank #: ABFH00000000 (NZ_ABFH00000000)
REBASE acronym: SenSL491
Org_num: 8057
All begin SeV_A, SeV_B
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 352 | membrane protein | |||
| 353 | R | SenUA13ORF1281P (100% identity) | SenSL491ORF354P | |
| 354 | M | M.SenR222ORF15240P (100% identity) | M.SenSL491ORF354P | |
| 355 | S | S.Sen10533ORF19305P (99% identity) | S.SenSL491ORF354P | |
| 357 | 43 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1513 | protein DamX | |||
| 1514 | M | M.StyTDamP (100% identity) | GATC | M.SenSL491DamP |
| 1515 | ribulose-phosphate 3-epimerase | |||
| 1620 | periplasmic protein | |||
| 1621 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenSL491ORF1621P |
| 1622 | DNA-binding protein Fis | |||
| 1945 | acetyltransferase, gnat family | |||
| 1946 | M | M.SenUA13ORF2340P (100% identity) | TGGCCA | M.SenSL491ORF1946P |
| 1947 | 921 aa hypothetical protein SeW_A4748 | |||
| 2353 | 76 aa conserved hypothetical protein | |||
| 2354 | M | M.SenB23ORFEP (100% identity) | GATC | M.SenSL491ORF2354P |
| 2355 | replication gene A protein | |||
| 2392 | C4-type zinc finger protein, DksA/TraR family | |||
| 2393 | M | M.SenS686ORF22035P (100% identity) | GATC | M.SenSL491ORF2393P |
| 2394 | bacteriophage replication gene A protein | |||
| 26 | modification methylase EcoRII | |||
| 27 | V | V.StyTDcmP (100% identity) | V.SenSL491DcmP | |
| 28 | carboxylate/amino acid/amine transporter | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1861 | cytochrome bd-II oxidase subunit 1 | |||
| 1862 | R | SenZYXORFDP (99% identity) | CAGAG | SenSL491ORF1863P |
| 1863 | M | M.SenWT7II (100% identity) | CAGAG | M.SenSL491ORF1863P |
| 1864 | major facilitator superfamily MFS_1 | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 25 | metal dependent phosphohydrolase | |||
| 26 | M | M.SenST01ORF6245P (100% identity) | CCWGG | M.SenSL491ORF26P |
| 27 | very short patch repair protein | |||