Escherichia coli MRSN346638 |
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Putative Escherichia coli MRSN346638 RM systems
Ref: Snesrud,E. et al. unpublished
REBASE ref # 23211
| Sequence length: | GenBank #: | |
| Chromosome: | 4,798,436 bp | CP018115 |
| plasmid pMRSN346638_119.3: | 119,254 bp | CP018116 |
| plasmid pMRSN346638_61.1: | 61,085 bp | CP018119 |
| plasmid pMRSN346638_67.9: | 67,946 bp | CP018117 |
REBASE acronym: Eco346638
Org_num: 21174
All begin BSG23_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10315 | IS5 family transposase | |||
| 10320 | R | EcoeV01ORF9070P (87% identity) | GATGNNNNNNTAC | Eco346638ORF10340P |
| 10325 | 594 aa hypothetical protein | |||
| 10330 | 227 aa hypothetical protein | |||
| 10335 | S | S.Ecos142ORF9685P (100% identity) | GATGNNNNNNTAC | S.Eco346638ORF10340P |
| 10340 | M | M.Ecos142ORF9685P (100% identity) | GATGNNNNNNTAC | M.Eco346638ORF10340P |
| 10345 | transposase | |||
| plasmid pMRSN346638_67.9 | ||||
| 24610 | prevent-host-death family protein | |||
| 24615 | M | M.EcoPTE6ORF23405P (100% identity) | M.Eco346638ORF24615P | |
| 24620 | S | S.Ecoi162ORF4671P (100% identity) | S.Eco346638ORF24615P | |
| 24625 | R | EcoPTE6ORF23405P (100% identity) | Eco346638ORF24615P | |
| 24630 | transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1380 | integrase | |||
| 1385 | M | M.EcosEC31ORF18555P (100% identity) | GTAC | M.Eco346638ORF1385P |
| 1390 | 568 aa hypothetical protein | |||
| 6400 | transcriptional regulator | |||
| 6405 | M | M.EcoEc42ORF13695P (100% identity) | GATC | M.Eco346638ORF6405P |
| 6410 | crossover junction endodeoxyribonuclease | |||
| 10615 | drug/metabolite exporter YedA | |||
| 10620 | V | V.SflC32DcmP (74% identity) | V.Eco346638DcmP | |
| 10625 | M | M.SflC32DcmP (100% identity) | CCWGG | M.Eco346638DcmP |
| 10630 | phosphohydrolase | |||
| 17495 | Fis family transcriptional regulator | |||
| 17500 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.Eco346638ORF17500P |
| 17505 | DUF2556 domain-containing protein | |||
| 18140 | ribulose-phosphate 3-epimerase | |||
| 18145 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco346638DamP |
| 18150 | cell division protein DamX | |||
| plasmid pMRSN346638_119.3 | ||||
| 23870 | 308 aa hypothetical protein | |||
| 23875 | M | M.StyR64ORFAP (100% identity) | M.Eco346638ORF23875P | |
| 23880 | 73 aa hypothetical protein | |||
| plasmid pMRSN346638_61.1 | ||||
| 25080 | 103 aa hypothetical protein | |||
| 25085 | M | M.Eco352231ORF25550P (100% identity) | M.Eco346638ORF25085P | |
| 25090 | 73 aa hypothetical protein | |||