Escherichia coli PA20 |
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Putative Escherichia coli PA20 RM systems
Ref: Uhlich,G.A. et al. unpublished
REBASE ref # 23382
| Sequence length: | GenBank #: | |
| Chromosome: | 5,525,846 bp | CP017669 |
| plasmid pO157: | 92,755 bp | CP017670 |
REBASE acronym: EcoPA20
Org_num: 21094
All begin AU473_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 27145 | 94 aa hypothetical protein | |||
| 27150 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | EcoPA20ORF27155P |
| 27155 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.EcoPA20ORF27155P |
| 27160 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.EcoPA20ORF27155P |
| 27165 | 113 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4860 | cell division protein DamX | |||
| 4865 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoPA20DamP |
| 4870 | ribulose-phosphate 3-epimerase | |||
| 5395 | DUF2556 domain-containing protein | |||
| 5400 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.EcoPA20ORF5400P |
| 5405 | Fis family transcriptional regulator | |||
| 11525 | protein ninB | |||
| 11530 | M | M.Eph2851ORFAP (100% identity) | GATC | M.EcoPA20ORF11530P |
| 11535 | protein ninE | |||
| 13200 | protein ninB | |||
| 13205 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.EcoPA20ORF13205P |
| 13210 | antirepressor | |||
| 16165 | TrmB family transcriptional regulator | |||
| 16170 | M | M.EcosPA8ORF27255P (100% identity) | M.EcoPA20ORF16170P | |
| 16185 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | |||
| 17750 | 329 aa hypothetical protein | |||
| 17755 | M | M.Ecos15739ORF2910P (100% identity) | M.EcoPA20ORF17755P | |
| 17760 | 81 aa hypothetical protein | |||
| 20925 | drug/metabolite exporter YedA | |||
| 20930 | V | V.EcosPA8DcmP (100% identity) | V.EcoPA20DcmP | |
| 20935 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoPA20DcmP |
| 20940 | phosphohydrolase | |||
| 27430 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | EcoPA20ORF27430P |
| 27435 | helicase | |||
| plasmid pO157 | ||||
| 28585 | 101 aa hypothetical protein | |||
| 28590 | M | M.EcosPA8ORF27775P (100% identity) | M.EcoPA20ORF28590P | |
| 28595 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 27165 | 113 aa hypothetical protein | |||
| ??? | R | EcoX21GmrDP (100% identity) | EcoPA20GmrDP | |
| 27175 | 293 aa hypothetical protein | |||