Escherichia coli 105547 |
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Putative Escherichia coli 105547 RM systems
Ref: Arivett,B.A. et al. unpublished
REBASE ref # 22688
Contig set: 4,857,774 bp
GenBank #: LOJM00000000 (NZ_LOJM00000000)
REBASE acronym: Eco105547
Org_num: 20933
All begin LT27_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| ??? | S | type I restriction endonuclease subunit S | S.Eco105547ORF4589P | |
| ??? | M | M.Ecos2020ORFGP (100% identity) | M.Eco105547ORF4589P | |
| 4590 | 73 aa hypothetical protein | |||
| 4415 | S | type-1 restriction enzyme specificity | S.Eco105547ORF4415P | |
| 4416 | R | KpnKPH1ORF27575P (100% identity) | Eco105547ORF4415P | |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4510 | M | M.UbapRSB107ORFAP (100% identity) | M.Eco105547ORF4510P | |
| 4511 | 308 aa hypothetical protein | |||
| 4605 | Plasmid stability protein | |||
| 4606 | M | M.EcoREF1ORF26250P (100% identity) | M.Eco105547ORF4606P | |
| 2522 | PerC transcriptional activator | |||
| 2523 | M | M.Sso30ORF925P (100% identity) | GATC | M.Eco105547ORF2523P |
| 2524 | LexA repressor | |||
| 2532 | 67 aa hypothetical protein | |||
| 2533 | M | M.Sso63633ORF22290P (100% identity) | M.Eco105547ORF2533P | |
| 2534 | Lysis protein S | |||
| 3992 | cell division protein DamX | |||
| 3993 | M | DNA adenine methylase | GATC | M.Eco105547DamP |
| 3994 | Ribulose-phosphate 3-epimerase | |||
| 2344 | Bacteriophage replication gene A protein (GPA) | |||
| 2345 | M | M.SflN92ORF14970P (100% identity) | GATC | M.Eco105547ORF2345P |
| 2346 | 75 aa hypothetical protein | |||
| 2087 | DNA-binding protein Fis | |||
| 2088 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.Eco105547ORF2088P |
| 2089 | 59 aa hypothetical protein | |||
| 863 | inner membrane transporter YedA | |||
| 864 | V | V.SsoSE61DcmP (100% identity) | V.Eco105547DcmP | |
| 865 | M | M.SspS13DcmP (100% identity) | CCWGG | M.Eco105547DcmP |
| 866 | hydrolase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1009 | 290 aa hypothetical protein | |||
| 1010 | R | SflSTLE4McrCP (100% identity) | Eco105547McrCP | |
| 1011 | R | SflSTLE4McrBP (100% identity) | Eco105547McrBP | |
| 1012 | IS66 Orf2 like protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1548 | 120 aa hypothetical protein | |||
| ??? | M | M.Eph43ORF57P (100% identity) | GATC | M.Eco105547ORF1549P |
| 1550 | NinB protein | |||