Escherichia coli RiKo 2351/09 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli RiKo 2351/09 RM systems
Ref: Leimbach,A. et al. unpublished
REBASE ref # 22656
Contig set: 5,297,190 bp
GenBank #: LAUC00000000 (NZ_LAUC00000000)
REBASE acronym: Eco2351
Org_num: 20899
All begin RIKO2351_106c, RIKO2351_180c, RIKO2351_212c, RIKO2351_219c, RIKO2351_45c, RIKO2351_50c, RIKO2351_70c, RIKO2351_94c
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 80 | 428 aa hypothetical protein | |||
| 90 | S | S.EcoMS851ORF22160P (100% identity) | S.Eco2351ORF100P | |
| 100 | M | M.EcoMS851ORF22160P (100% identity) | M.Eco2351ORF100P | |
| 110 | 128 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 50 | 64 aa hypothetical protein | |||
| 60 | M | M.EcoO78ORF6265P (100% identity) | M.Eco2351ORF60P | |
| 70 | 67 aa hypothetical protein | |||
| 60 | membrane protein | |||
| 70 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.Eco2351ORF70P |
| 80 | integrase of prophage | |||
| 210 | 546 aa hypothetical protein | |||
| 220 | M | M.EspP049ORF3912P (100% identity) | M.Eco2351ORF220P | |
| 230 | DNA-binding protein | |||
| 360 | amino acid exporter for phenylalanine, | |||
| 370 | V | V.SsoSE61DcmP (100% identity) | V.Eco2351DcmP | |
| 380 | M | M.SsoSE61DcmP (100% identity) | CCWGG | M.Eco2351DcmP |
| 390 | HD superfamily phosphohydrolase | |||
| 470 | D-ribulose-5-phosphate 3-epimerase | |||
| 480 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco2351DamP |
| 490 | cell division protein that binds to the septal | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 110 | 128 aa hypothetical protein | |||
| 120 | R | Ecows53McrCP (100% identity) | Eco2351McrCP | |
| 130 | R | Ecows53McrBP (100% identity) | Eco2351McrBP | |
| 140 | restriction endonuclease | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10 | M | M.SflFF60ORF5615P (100% identity) | GATC | M.Eco2351ORF10P |
| 10 | M | M.SflFF60ORF5615P (100% identity) | GATC | M.Eco2351ORF10P |
| 20 | 453 aa hypothetical protein | |||