Escherichia coli RiKo 2340/09 |
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Putative Escherichia coli RiKo 2340/09 RM systems
Ref: Leimbach,A. et al. unpublished
REBASE ref # 22656
Contig set: 5,024,854 bp
GenBank #: LAGW00000000 (NZ_LAGW00000000)
REBASE acronym: Eco2340
Org_num: 20898
All begin RIKO2340_108c, RIKO2340_131c, RIKO2340_200c, RIKO2340_45c, RIKO2340_74c, RIKO2340_77c, RIKO2340_86c
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 10 | R | EcoF247ORF27750P (100% identity) | Eco2340ORF30P | |
| 20 | S | S.EcoS19651ORF13565P (100% identity) | S.Eco2340ORF30P | |
| 30 | M | M.EcoS19651ORF13565P (100% identity) | M.Eco2340ORF30P | |
| 40 | 212 aa hypothetical protein | |||
| 20 | SIR2-like domain protein | |||
| 30 | S | S.EcoECB1ORF9045P (100% identity) | S.Eco2340ORF40P | |
| 40 | M | M.EcoDEC2DORF4922P (100% identity) | M.Eco2340ORF40P | |
| 50 | R | EcoC0331ORF7685P (100% identity) | Eco2340ORF40P | |
| 60 | transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 60 | 73 aa hypothetical protein | |||
| 70 | M | M.KpnVA569ORF28145P (100% identity) | M.Eco2340ORF70P | |
| 80 | 308 aa hypothetical protein | |||
| 320 | integrase | |||
| 330 | M | M.EcosEC31ORF18555P (100% identity) | GGTACC | M.Eco2340ORF330P |
| 340 | 568 aa hypothetical protein | |||
| 410 | global DNA-binding transcriptional dual | |||
| 420 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.Eco2340ORF420P |
| 760 | D-ribulose-5-phosphate 3-epimerase | |||
| 770 | M | DNA adenine methyltransferase | GATC | M.Eco2340DamP |
| 780 | cell division protein that binds to the septal | |||
| 3820 | amino acid exporter for phenylalanine, | |||
| 3830 | V | V.SsoSE61DcmP (100% identity) | V.Eco2340DcmP | |
| 3840 | M | M.SspS13DcmP (100% identity) | CCWGG | M.Eco2340DcmP |
| 3850 | HD superfamily phosphohydrolase | |||