Escherichia coli E44 |
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Putative Escherichia coli E44 RM systems
Ref: Ronco,T. et al. Genome Announc 4 (4) (2016)
REBASE ref # 22622
Contig set: 5,125,126 bp
GenBank #: LXWV00000000 (NZ_LXWV00000000)
REBASE acronym: EcoE44
Org_num: 20941
All begin A8A56_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 25795 | M | type I restriction-modification system subunit | M.EcoE44ORF25795P | |
| 23390 | restriction endonuclease | |||
| 23395 | M | M.Ecos641ORF3050P (100% identity) | M.EcoE44ORF23395P | |
| 23400 | S | S.Ecos641ORF3050P (100% identity) | S.EcoE44ORF23395P | |
| 23405 | R | Ecos641ORF3050P (100% identity) | EcoE44ORF23395P | |
| 23410 | 112 aa hypothetical protein | |||
| 9960 | DNA-binding protein | |||
| 9965 | M | M.Ecos641ORF18845P (100% identity) | M.EcoE44ORF9965P | |
| 9970 | S | S.EcoWH398ORF26840P (100% identity) | S.EcoE44ORF9965P | |
| 9975 | R | EcoW087ORF4400P (100% identity) | EcoE44ORF9965P | |
| 9980 | lactate utilization protein B/C | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 16605 | R | SflFF80ORF21000P (100% identity) | YGGCCR | EcoE44ORF16610P |
| ??? | M | M.Sen624ORF21070P (100% identity) | YGGCCR | M.EcoE44ORF16610P |
| 16615 | 74 aa hypothetical protein | |||
| 20740 | 162 aa hypothetical protein | |||
| 20745 | M | M.Sso90ORF15820P (100% identity) | GATC | M.EcoE44ORF20745P |
| 20750 | LexA family transcriptional regulator | |||
| 20780 | 67 aa hypothetical protein | |||
| 20785 | M | M.Sso63633ORF22290P (100% identity) | M.EcoE44ORF20785P | |
| 20790 | holin | |||
| 4695 | 146 aa hypothetical protein | |||
| 4700 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.EcoE44ORF4700P |
| 4705 | protein ninE | |||
| 425 | drug/metabolite exporter YedA | |||
| 430 | V | V.EcosEC7DcmP (100% identity) | CCWGG | V.EcoE44DcmP |
| 435 | M | M.SdySWHE2DcmP (100% identity) | CCWGG | M.EcoE44DcmP |
| 440 | phosphohydrolase | |||
| 5050 | cell division protein DamX | |||
| 5055 | M | M.Sdy59952DamP (100% identity) | GATC | M.EcoE44DamP |
| 5060 | ribulose-phosphate 3-epimerase | |||
| 14455 | Fis family transcriptional regulator | |||
| 14460 | M | M.EcoWH398ORF17455P (100% identity) | ATGCAT | M.EcoE44ORF14460P |
| 14465 | 59 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 12980 | transcriptional regulator | |||
| 12985 | M | M.SflFF34ORF8575P (100% identity) | GATC | M.EcoE44ORF12985P |
| 12990 | serine/threonine protein phosphatase | |||