Burkholderia ubonensis MSMB2035 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Burkholderia ubonensis MSMB2035 RM systems
Ref: Sahl,J. et al. unpublished
REBASE ref # 21205
| Sequence length: | GenBank #: | |
| chromosome 1: | 3,935,154 bp | CP013414 |
| chromosome 2: | 3,000,610 bp | CP013416 |
| plasmid pMSMB2035: | 299,296 bp | CP013415 |
REBASE acronym: Bub2035
Org_num: 20019
All begin WJ32_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 2390 | 306 aa hypothetical protein | |||
| 2395 | M | M.SmaM30ORF9585P (95% identity) | M.Bub2035ORF2395P | |
| 2400 | S | S.SfoJG42ORFEP (55% identity) | S.Bub2035ORF2395P | |
| 2405 | R | Rps1931ORF2785P (96% identity) | Bub2035ORF2395P | |
| 2410 | 362 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 8220 | 469 aa hypothetical protein | |||
| 8225 | M | M.PspD15ORF20930P (72% identity) | M.Bub2035ORF8225P | |
| 8230 | 211 aa hypothetical protein | |||
| 10065 | LysR family transcriptional regulator | |||
| 10070 | M | M.Bub2035ORF10850P (98% identity) | M.Bub2035ORF10070P | |
| 10075 | 164 aa hypothetical protein | |||
| 10845 | 82 aa hypothetical protein | |||
| 10850 | M | M.BspJSH58ORF12180P (98% identity) | M.Bub2035ORF10850P | |
| 10855 | 166 aa hypothetical protein | |||
| chromosome 2 | ||||
| 23680 | tryptophan synthase subunit beta | |||
| 23685 | M | M.Bub1471ORF20290P (98% identity) | GTWWAC | M.Bub2035ORF23685P |
| 23690 | tryptophan synthase subunit alpha | |||
| plasmid pMSMB2035 | ||||
| 18405 | aldose epimerase | |||
| ??? | M | hypothetical protein | M.Bub2035ORFAP | |
| 18410 | pseudogene | |||
| 19205 | 150 aa hypothetical protein | |||
| 19210 | M | M.BubRF23ORF4465P (95% identity) | M.Bub2035ORF19210P | |
| 19215 | 106 aa hypothetical protein | |||
| 19230 | 157 aa hypothetical protein | |||
| 19235 | M | M.BubRF23ORF4440P (99% identity) | M.Bub2035ORF19235P | |
| 19240 | 169 aa hypothetical protein | |||
| 19460 | conjugal transfer protein TraF | |||
| 19465 | M | M.Bvi608ORF7390P (66% identity) | CCCGGG | M.Bub2035ORF19465P |
| 19470 | 135 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 240 | 289 aa hypothetical protein | |||
| 245 | R | BubRF23ORF4745P (99% identity) | Bub2035ORF250P | |
| 250 | M | M.Bmu496ORF26935P (99% identity) | M.Bub2035ORF250P | |
| 255 | porin | |||