Clostridioides difficile |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Clostridioides difficile RM systems
Ref: Wasels,Francois unpublished
REBASE ref # 22284
Contig set: 4,238,925 bp
GenBank #: FAXM00000000 (NZ_FAXM00000000)
REBASE acronym: Cdi1118
Org_num: 20262
All begin ORF_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 54 | 687 aa hypothetical protein | |||
| 55 | R | Cdi815ORF4925P (100% identity) | GCAYNNNNNNTTC | Cdi1118ORFAP |
| 57 | nucleotidyltransferase domain protein | |||
| 58 | nucleotidyltransferase | |||
| 59 | 102 aa hypothetical protein | |||
| 60 | 66 aa hypothetical protein | |||
| 61 | S | S.Pdi6602ORF710241P (100% identity) | GCAYNNNNNNTTC | S.Cdi1118ORFAP |
| 62 | M | M.Pdi6602ORF710241P (100% identity) | GCAYNNNNNNTTC | M.Cdi1118ORFAP |
| 63 | ketose-bisphosphate aldolase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 11 | nlpC/P60 family protein | |||
| 17 | M | M.PmeBin637ORFAP (100% identity) | CCSSGG | M.Cdi1118ORFCP |
| 21 | ATPase AAA | |||
| 71 | phospholipase | |||
| 72 | M | M.CdiRSS3ORF14215P (100% identity) | CAAAAA | M.Cdi1118ORFBP |
| 73 | transcriptional regulator family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 14 | 102 aa hypothetical protein | |||
| 15 | R | Pdi630McrCP (100% identity) | Cdi1118McrCP | |
| 16 | R | CdiEW52McrBP (100% identity) | Cdi1118McrBP | |
| 17 | cell division protein FtsZ | |||