Synechococcus species PCC 8807 |
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Putative Synechococcus species PCC 8807 RM systems
Ref: Liu,Z. et al. unpublished
REBASE ref # 22500
| Sequence length: | GenBank #: | |
| Chromosome: | 3,059,495 bp | CP016483 |
| plasmid unnamed3: | 15,538 bp | CP016486 |
| plasmid unnamed4: | 18,454 bp | CP016487 |
| plasmid unnamed5: | 27,205 bp | CP016488 |
REBASE acronym: Ssp8807
Org_num: 20064
All begin AWQ24_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 11925 | 459 aa hypothetical protein | |||
| 11930 | M | M.AvaORF499P (83% identity) | M.Ssp8807ORF11930P | |
| 11935 | S | S.Ssp3221ORF5785P (45% identity) | S.Ssp8807ORF11930P | |
| 11940 | DNA polymerase subunit beta | |||
| 11945 | nucleotidyltransferase | |||
| 11950 | R | Asp90ORF12925P (58% identity) | Ssp8807ORF11930P | |
| 11955 | light-independent protochlorophyllide reductase | |||
| plasmid unnamed3 | ||||
| 14750 | 109 aa hypothetical protein | |||
| 14755 | M | M.AquV (95% identity) | M.Ssp8807ORF14755P | |
| 14760 | S | S.Mae1339ORF6550P (48% identity) | S.Ssp8807ORF14755P | |
| 14765 | prevent-host-death protein | |||
| 14770 | twitching motility protein PilT | |||
| 14775 | R | AquVP (97% identity) | Ssp8807ORF14755P | |
| 14780 | transposase | |||
| plasmid unnamed4 | ||||
| 14840 | 89 aa hypothetical protein | |||
| 14845 | R | Sst15041ORFEP (90% identity) | Ssp8807ORF14890P | |
| 14850 | 226 aa hypothetical protein | |||
| 14855 | 149 aa hypothetical protein | |||
| 14860 | 146 aa hypothetical protein | |||
| 14865 | S | S.Ssp7502ORFAP (47% identity) | S.Ssp8807ORF14890P | |
| 14870 | nucleotidyltransferase | |||
| 14875 | DNA polymerase subunit beta | |||
| 14880 | twitching motility protein PilT | |||
| 14885 | 71 aa hypothetical protein | |||
| 14890 | M | M.Sst15041ORFEP (86% identity) | M.Ssp8807ORF14890P | |
| 14895 | 233 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1895 | prevent-host-death family protein | |||
| 1900 | RM | AquII (100% identity) | Ssp8807ORF1900P | |
| 1905 | Tol biopolymer transporter periplasmic protein | |||
| 4350 | PleD protein | |||
| 4355 | M | M.Ssp11901ORF8340P (99% identity) | CGATCG | M.Ssp8807ORF4355P |
| 4360 | UDP-N-acetylmuramoylalanine--D-glutamate ligase | |||
| 8970 | delta-aminolevulinic acid dehydratase | |||
| 8975 | M | M.TorNK122ORF3310P (78% identity) | CAGCTG | M.Ssp8807ORF8975P |
| ??? | C | C.Lfu8579ORF4815P (62% identity) | C.Ssp8807ORF8975P | |
| 8980 | R | SspB12ORF12090P (85% identity) | CAGCTG | Ssp8807ORF8975P |
| 8985 | 206 aa hypothetical protein | |||
| 10870 | homoserine dehydrogenase | |||
| 10875 | RM | Ssp130192ORFDP (98% identity) | Ssp8807ORF10875P | |
| 10880 | 130 aa hypothetical protein | |||
| 11750 | 68 aa hypothetical protein | |||
| 11755 | RM | AquIV (86% identity) | Ssp8807ORF11755P | |
| 11760 | DUF2281 domain-containing protein | |||
| plasmid unnamed5 | ||||
| 15040 | 125 aa hypothetical protein | |||
| 15045 | M | M.AquORF12P (89% identity) | M.Ssp8807ORF15045P | |
| 15050 | 353 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5100 | magnesium chelatase subunit H | |||
| 5105 | R | AquMrrP (99% identity) | Ssp8807MrrP | |
| 5110 | 3-oxoacyl-ACP synthase | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8205 | PBS lyase | |||
| 8210 | M | M.Ssp73109ORF8305P (98% identity) | GATC | M.Ssp8807ORF8210P |
| 8215 | 124 aa hypothetical protein | |||