Synechococcus species PCC 7117 |
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Putative Synechococcus species PCC 7117 RM systems
Ref: Liu,Z. et al. unpublished
REBASE ref # 22500
| Sequence length: | GenBank #: | |
| Chromosome: | 3,087,720 bp | CP016477 |
| plasmid unnamed3: | 25,572 bp | CP016480 |
| plasmid unnamed4: | 41,976 bp | CP016481 |
REBASE acronym: Ssp7117
Org_num: 20059
All begin AWQ22_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 11285 | 130 aa hypothetical protein | |||
| 11290 | M | M.Ssp130192ORFHP (99% identity) | M.Ssp7117ORF11290P | |
| 11295 | S | S.Ssp130192ORFHP (97% identity) | S.Ssp7117ORF11290P | |
| 11300 | 122 aa hypothetical protein | |||
| 11305 | twitching motility protein PilT | |||
| 11310 | transcriptional regulator | |||
| 11315 | R | Ssp130192ORFHP (97% identity) | Ssp7117ORF11290P | |
| 11320 | 3-chlorobenzoate-3,4-dioxygenase | |||
| plasmid unnamed3 | ||||
| 14765 | 110 aa hypothetical protein | |||
| 14770 | M | M.Ssp7003ORF14610P (90% identity) | M.Ssp7117ORF14770P | |
| 14775 | nucleotidyltransferase | |||
| 14780 | 70 aa hypothetical protein | |||
| 14785 | plasmid stabilization protein | |||
| 14790 | DNA polymerase subunit beta | |||
| 14795 | 115 aa hypothetical protein | |||
| 14800 | S | S.Acy7122ORF6051P (46% identity) | S.Ssp7117ORF14770P | |
| 14805 | twitching motility protein PilT | |||
| 14810 | antitoxin | |||
| 14815 | R | Ssp7003ORF14610P (80% identity) | Ssp7117ORF14770P | |
| 14820 | 100 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1860 | 398 aa hypothetical protein | |||
| 1865 | RM | Ssp8807ORF1900P (89% identity) | GCCGNAC | Ssp7117ORF1865P |
| 1870 | Tol biopolymer transporter periplasmic protein | |||
| 4335 | 115 aa hypothetical protein | |||
| 4340 | M | M.Ssp8807ORF4355P (97% identity) | CGATCG | M.Ssp7117ORF4340P |
| 4345 | UDP-N-acetylmuramoylalanine--D-glutamate ligase | |||
| 6060 | 189 aa hypothetical protein | |||
| ??? | M | M.Ssp42902ORFCAP (63% identity) | CYCGRG | M.Ssp7117ORF6065P |
| ??? | R | Ssp42902ORFCP (100% identity) | CYCGRG | Ssp7117ORF6065P |
| 6080 | peptidase U32 | |||
| 9150 | DNA-binding protein | |||
| 9155 | RM | Ssp130192ORFGP (88% identity) | Ssp7117ORF9155P | |
| 9160 | 90 aa hypothetical protein | |||
| 11630 | pyridine nucleotide-disulfide oxidoreductase | |||
| 11635 | RM | Ssp11901ORF15840P (83% identity) | Ssp7117ORF11635P | |
| 11640 | 102 aa hypothetical protein | |||
| plasmid unnamed4 | ||||
| 15025 | 297 aa hypothetical protein | |||
| 15030 | R | TsyCad16ORFZP (63% identity) | Ssp7117ORF15040P | |
| 15035 | 659 aa hypothetical protein | |||
| 15040 | M | M.Pag1268ORF4539P (55% identity) | M.Ssp7117ORF15040P | |
| 15045 | 113 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8340 | PBS lyase | |||
| 8345 | M | M.Ssp130192ORFAP (98% identity) | GATC | M.Ssp7117ORF8345P |
| 8350 | 124 aa hypothetical protein | |||