Synechococcus species PCC 7003 |
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Putative Synechococcus species PCC 7003 RM systems
Ref: Liu,Z. et al. unpublished
REBASE ref # 22500
| Sequence length: | GenBank #: | |
| Chromosome: | 3,057,091 bp | CP016474 |
| plasmid unnamed1: | 34,738 bp | CP016475 |
| plasmid unnamed2: | 253,256 bp | CP016476 |
REBASE acronym: Ssp7003
Org_num: 20049
All begin AWQ21_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2240 | 819 aa hypothetical protein | |||
| 2245 | M | M.Llo41211ORF14725P (74% identity) | M.Ssp7003ORF2245P | |
| 2250 | twitching motility protein PilT | |||
| 2255 | 66 aa hypothetical protein | |||
| 2260 | 106 aa hypothetical protein | |||
| 2265 | S | S.Nsp5183ORF40025P (25% identity) | S.Ssp7003ORF2245P | |
| 2270 | 115 aa hypothetical protein | |||
| 2275 | DNA polymerase beta | |||
| 2280 | R | MkoLM6ORF472P (66% identity) | Ssp7003ORF2245P | |
| 2285 | peptidase M3 | |||
| plasmid unnamed1 | ||||
| 14605 | 65 aa hypothetical protein | |||
| 14610 | M | M.Cspa4ORF18800P (87% identity) | M.Ssp7003ORF14610P | |
| 14615 | DNA polymerase subunit beta | |||
| 14620 | 117 aa hypothetical protein | |||
| 14625 | S | S.Pag365ORF4467P (48% identity) | S.Ssp7003ORF14610P | |
| 14630 | 219 aa hypothetical protein | |||
| 14635 | R | Ssp7117ORF14770P (80% identity) | Ssp7003ORF14610P | |
| 14455 | cobyrinic acid a,c-diamide synthase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1870 | 285 aa hypothetical protein | |||
| 1875 | M | M2.Lro951ORF14250P (42% identity) | GGATCC | M.Ssp7003ORF1875P |
| 1880 | R | HauORF2756P (44% identity) | GGATCC | Ssp7003ORF1875P |
| ??? | C | C.EsaMIORFDP (53% identity) | C.Ssp7003ORF1875P | |
| 1885 | 232 aa hypothetical protein | |||
| 3285 | 83 aa hypothetical protein | |||
| 3290 | M | M.TlaWSORF7380P (71% identity) | GCCGGC | M.Ssp7003ORF3290P |
| 3295 | iron ABC transporter | |||
| 5390 | UDP-N-acetylmuramoylalanine--D-glutamate ligase | |||
| 5395 | M | M.Ssp8807ORF4355P (93% identity) | CGATCG | M.Ssp7003ORF5395P |
| 5400 | PleD protein | |||
| 10530 | 60 aa hypothetical protein | |||
| 10535 | RM | Ssp8807ORF1900P (69% identity) | Ssp7003ORF10535P | |
| 10540 | 220 aa hypothetical protein | |||
| 12780 | 83 aa hypothetical protein | |||
| 12785 | RM | CspESFC1ORFIP (56% identity) | Ssp7003ORF12785P | |
| 12790 | 277 aa hypothetical protein | |||
| 12970 | DUF2281 domain-containing protein | |||
| 12975 | RM | Ssp11901ORF15840P (93% identity) | Ssp7003ORF12975P | |
| 12980 | 68 aa hypothetical protein | |||
| 13695 | cytochrome C551 | |||
| 13700 | M | M.Ssp42902ORFKP (99% identity) | GCTNAGC | M.Ssp7003ORF13700P |
| 13705 | R | Ssp42902ORFKP (97% identity) | GCTNAGC | Ssp7003ORF13700P |
| 13710 | 99 aa hypothetical protein | |||
| plasmid unnamed2 | ||||
| 15090 | 121 aa hypothetical protein | |||
| 15095 | M | M.LboCZ1ORF5910P (60% identity) | M.Ssp7003ORF15090P | |
| 15100 | 96 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4625 | 3-oxoacyl-ACP synthase | |||
| 4630 | R | Ssp8807MrrP (92% identity) | Ssp7003MrrP | |
| 4635 | magnesium chelatase subunit H | |||
| 11205 | phycocyanobilin lyase | |||
| 11210 | R | Psp001McrBP (27% identity) | Ssp7003McrBP | |
| 11215 | R | Lsp010McrCP (29% identity) | Ssp7003McrCP | |
| 11220 | saccharopine dehydrogenase-like oxidoreductase | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7875 | PBS lyase | |||
| 7880 | M | M.Ssp130192ORFAP (88% identity) | GATC | M.Ssp7003ORF7880P |
| 7885 | 124 aa hypothetical protein | |||