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Putative Rhodococcus species 008 RM systems
Ref: Loewen,P.C. and Brassinga,K. unpublished
REBASE ref # 22754
Sequence length: | GenBank #: | |
Chromosome: | 6,570,200 bp | CP012749 |
plasmid pR8C1: | 108,503 bp | CP015204 |
plasmid pR8L1: | 694,228 bp | CP015203 |
REBASE acronym: Rsp008
Org_num: 19720
All begin AOT96_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
29155 | 270 aa hypothetical protein | |||
29160 | M | M.RruP25ORFHP (92% identity) | AGCNNNNNNNTGGA | M.Rsp008I |
29165 | S | S.Csp035ORF6265P (59% identity) | AGCNNNNNNNTGGA | S.Rsp008I |
29170 | R | RspBH4ORF31695P (93% identity) | AGCNNNNNNNTGGA | Rsp008IP |
29175 | 475 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
395 | 1149 aa hypothetical protein | |||
400 | RM | RspB066ORF22360P (67% identity) | GCCCAT | Rsp008V |
405 | 779 aa hypothetical protein | |||
12205 | 229 aa hypothetical protein | |||
12210 | V | V.RspP2ORF14690P (100% identity) | CTCGAG | V.Rsp008IIIP |
12215 | 286 aa hypothetical protein | |||
12220 | M | M.RspBH4ORF1670P (100% identity) | CTCGAG | M.Rsp008III |
12225 | 171 aa hypothetical protein | |||
22060 | 116 aa hypothetical protein | |||
22065 | M | M.RqiVT6ORF6050P (93% identity) | CCCGGG | M.Rsp008ORF22065P |
22070 | 210 aa hypothetical protein | |||
22345 | 227 aa hypothetical protein | |||
22350 | R | RqiVT6ORF6350P (88% identity) | GCCGGC | Rsp008IIP |
22355 | M | M.RqiVT6ORF6350P (100% identity) | GCCGGC | M.Rsp008II |
22360 | 61 aa hypothetical protein | |||
30205 | TetR family transcriptional regulator | |||
30210 | M | M.RqiPM1ORF18905P (99% identity) | AACGTT | M.Rsp008ORF30210P |
30220 | Bcr/CflA family drug resistance efflux | |||
plasmid pR8C1 | ||||
33865 | transposase | |||
33870 | RM | Rer8036I (99% identity) | ACGCAG | Rsp008IV |
33875 | NgoFVII family restriction endonuclease | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
plasmid pR8L1 | ||||
31545 | 70 aa hypothetical protein | |||
31550 | R | RerR138McrCP (60% identity) | Rsp008McrCP | |
31555 | 90 aa hypothetical protein | |||
31560 | R | RqiIGTS8McrBP (27% identity) | Rsp008McrBP | |
31565 | 218 aa hypothetical protein |