Salmonella enterica subsp. enterica serovar Berta OLC-759 |
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Putative Salmonella enterica subsp. enterica serovar Berta OLC-759 RM systems
Ref: Cooper,A. et al. Genome Announc 4 (2) (2016)
REBASE ref # 22012
Contig set: 4,718,628 bp
GenBank #: JZUV00000000 (NZ_JZUV00000000)
REBASE acronym: SenBNA
Org_num: 19344
All begin VI32_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 12885 | transporter | |||
| 12890 | R | StySBLI (100% identity) | GGYANNNNNNTCG | SenBNAORF12900P |
| 12895 | S | S.StySBLI (100% identity) | GGYANNNNNNTCG | S.SenBNAORF12900P |
| 12900 | M | M.StySBLI (100% identity) | GGYANNNNNNTCG | M.SenBNAORF12900P |
| 12905 | 90 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 22395 | crossover junction endodeoxyribonuclease | |||
| 22400 | M | M.SenBertaORF5245P (100% identity) | GATC | M.SenBNAORF22400P |
| 22405 | 160 aa hypothetical protein | |||
| 13675 | endonuclease | |||
| 13680 | M | M.SenS334ORF5985P (100% identity) | GATC | M.SenBNAORF13680P |
| 13685 | 75 aa hypothetical protein | |||
| 2780 | Fis family transcriptional regulator | |||
| 2785 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenBNAORF2785P |
| 2790 | membrane protein | |||
| 5900 | ribulose-phosphate 3-epimerase | |||
| 5905 | M | M.StyTDamP (100% identity) | GATC | M.SenBNADamP |
| 5910 | cell division protein DamX | |||
| 22915 | multidrug DMT transporter | |||
| 22920 | V | V.StyUK1DcmP (100% identity) | V.SenBNADcmP | |
| 22925 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.SenBNADcmP |
| 22930 | hydrolase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9190 | 33 aa hypothetical protein | |||
| 9195 | R | SenS334ORF18010P (99% identity) | CAGAG | SenBNAORF9200P |
| 9200 | M | M.SenST224ORF2660P (100% identity) | CAGAG | M.SenBNAORF9200P |
| 9205 | sugar transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 12900 | DNA methyltransferase | |||
| ??? | R | Ssp3CMrrP (100% identity) | SenBNAMrrP | |
| 12920 | restriction endonuclease subunit M | |||