Salmonella enterica NGUA18 |
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Putative Salmonella enterica NGUA18 RM systems
Ref: Useh,N.M. et al. Genome Announc 4 (2016)
REBASE ref # 21975
Contig set: 5,259,276 bp
GenBank #: BCOQ00000000 (NZ_BCOQ00000000)
REBASE acronym: SenUA18
Org_num: 19300
All begin NGUA18_, ORF_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1 | S | S.SenUA36ORF834P (38% identity) | S.SenUA18ORFCP | |
| 2 | M | restriction endonuclease EcoEI subunit M | M.SenUA18ORFBP | |
| 4826 | M | 58 aa hypothetical protein | M.SenUA18ORF4826P | |
| ??? | S | S.SenUA36ORF834P (22% identity) | S.SenUA18ORF4826P | |
| 2990 | 322 aa hypothetical protein | |||
| 2991 | R | SspA292ORF20040P (100% identity) | SenUA18ORF2992P | |
| 2992 | M | M.SspA292ORF20040P (100% identity) | M.SenUA18ORF2992P | |
| 2993 | S | S.SspA292ORF20040P (100% identity) | S.SenUA18ORF2992P | |
| 2994 | toxic protein SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1 | M | DNA adenine methylase | M.SenUA18ORFDP | |
| 1 | M | M2.SenUA36ORF1996P (39% identity) | M.SenUA18ORFAP | |
| ??? | M | M1.SenUA36ORF1996P (63% identity) | GATC | M.SenUA18ORF4188P |
| 4189 | perC transcriptional activator | |||
| 407 | LexA repressor | |||
| 408 | M | C-5 cytosine-specific DNA methylase | M.SenUA18ORF408P | |
| 4251 | bacteriophage replication gene A protein | |||
| 4252 | M | M.SenUA39ORF1528P (100% identity) | GATC | M.SenUA18ORF4252P |
| 4253 | 76 aa hypothetical protein | |||
| 4813 | prophage CP4-57 integrase | |||
| 4814 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenUA18ORF4814P |
| 4815 | 54 aa hypothetical protein | |||
| 3026 | 1204 aa hypothetical protein | |||
| 3027 | RM | SspA292ORF20215P (100% identity) | SenUA18ORF3027P | |
| 3028 | DNA replication and repair protein RecF | |||
| 687 | hydrolase | |||
| 688 | M | M.SspZ54DcmP (100% identity) | CCWGG | M.SenUA18DcmP |
| 689 | V | V.StyUK1DcmP (100% identity) | V.SenUA18DcmP | |
| 690 | inner membrane transporter YedA | |||
| 2837 | cell division protein DamX | |||
| 2838 | M | M.StyTDamP (100% identity) | GATC | M.SenUA18DamP |
| 2839 | ribulose-phosphate 3-epimerase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2315 | sialic acid transporter | |||
| 2316 | M | M.SspA292ORF17210P (100% identity) | CAGAG | M.SenUA18ORF2316P |
| 2317 | R | SspA292ORF17210P (100% identity) | CAGAG | SenUA18ORF2316P |
| 2318 | 33 aa hypothetical protein | |||