Salmonella enterica subsp. enterica ADRDL-LA-8-2013 |
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Putative Salmonella enterica subsp. enterica ADRDL-LA-8-2013 RM systems
Ref: Amachawadi,R.G. et al. Genome Announc 4 (3) (2016)
REBASE ref # 21974
Contig set: 4,979,081 bp
GenBank #: LSLW00000000 (NZ_LSLW00000000)
REBASE acronym: SenLA8
Org_num: 19500
All begin AGQ52_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| ??? | M | type I restriction-modification system, M subunit | M.SenLA8ORF24750P | |
| 5505 | 106 aa hypothetical protein | |||
| 5510 | S | S.SenXB08ORF19780P (100% identity) | S.SenLA8ORF5515P | |
| 5515 | M | M.SenXB08ORF19780P (100% identity) | M.SenLA8ORF5515P | |
| 5520 | R | SenXB08ORF19780P (100% identity) | SenLA8ORF5515P | |
| 5525 | 322 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 50 | 54 aa hypothetical protein | |||
| 55 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenLA8ORF55P |
| 60 | Fis family transcriptional regulator | |||
| 22040 | drug/metabolite exporter YedA | |||
| 22045 | V | V.StyUK1DcmP (100% identity) | V.SenLA8DcmP | |
| 22050 | M | M.SenXB08DcmP (100% identity) | CCWGG | M.SenLA8DcmP |
| 22055 | hydrolase | |||
| 15405 | cell division protein DamX | |||
| 15410 | M | M.StyTDamP (100% identity) | GATC | M.SenLA8DamP |
| 15415 | ribulose phosphate epimerase | |||
| 7625 | endopeptidase | |||
| ??? | M | M.SenU1590ORF11730P (100% identity) | M.SenLA8ORF7630P | |
| 7635 | lysozyme | |||
| 7675 | methyltransferase | |||
| 7680 | M | M.Sens29945ORF7970P (100% identity) | GATC | M.SenLA8ORF7680P |
| 7685 | 82 aa hypothetical protein | |||
| 5350 | histidine kinase | |||
| 5355 | M | M.SenXB08ORF19920P (100% identity) | RCCGGY | M.SenLA8ORF5355P |
| 5360 | transposase | |||
| 3315 | 109 aa hypothetical protein | |||
| 3320 | M | M.SenU1590ORF19885P (100% identity) | GATC | M.SenLA8ORF3320P |
| 3325 | replication protein A | |||
| 3510 | 75 aa hypothetical protein | |||
| 3515 | M | M.SenU1590ORF19690P (100% identity) | GATC | M.SenLA8ORF3515P |
| 3520 | endonuclease | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 11875 | 33 aa hypothetical protein | |||
| ??? | R | SspA292ORF17210P (100% identity) | CAGAG | SenLA8ORF11885P |
| 11885 | M | M.SenXB08ORF17480P (100% identity) | CAGAG | M.SenLA8ORF11885P |
| 11890 | sugar transporter | |||