Salmonella enterica subsp. enterica ADRDL-LA-10-2013 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica subsp. enterica ADRDL-LA-10-2013 RM systems
Ref: Amachawadi,R.G. et al. Genome Announc 4 (3) (2016)
REBASE ref # 21974
Contig set: 4,973,701 bp
GenBank #: LSMA00000000 (NZ_LSMA00000000)
REBASE acronym: SenLA10
Org_num: 19502
All begin AGQ54_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 24745 | M | SAM-dependent methyltransferase | M.SenLA10ORF24745P | |
| 5500 | 106 aa hypothetical protein | |||
| 5505 | S | S.SenXB08ORF19780P (100% identity) | S.SenLA10ORF5510P | |
| 5510 | M | M.SenXB08ORF19780P (100% identity) | M.SenLA10ORF5510P | |
| 5515 | R | SenXB08ORF19780P (100% identity) | SenLA10ORF5510P | |
| 5520 | 322 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17445 | ribulose phosphate epimerase | |||
| 17450 | M | M.StyTDamP (100% identity) | GATC | M.SenLA10DamP |
| 17455 | cell division protein DamX | |||
| 50 | 54 aa hypothetical protein | |||
| 55 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenLA10ORF55P |
| 60 | Fis family transcriptional regulator | |||
| 11385 | drug/metabolite exporter YedA | |||
| 11390 | V | V.StyUK1DcmP (100% identity) | V.SenLA10DcmP | |
| 11395 | M | M.SenXB08DcmP (100% identity) | CCWGG | M.SenLA10DcmP |
| 11400 | hydrolase | |||
| 7710 | endopeptidase | |||
| ??? | M | M.SenU1590ORF11730P (100% identity) | M.SenLA10ORF7715P | |
| 7720 | lysozyme | |||
| 7760 | methyltransferase | |||
| 7765 | M | M.Sens29945ORF7970P (100% identity) | GATC | M.SenLA10ORF7765P |
| 7770 | 82 aa hypothetical protein | |||
| 5345 | histidine kinase | |||
| 5350 | M | M.SenXB08ORF19920P (100% identity) | RCCGGY | M.SenLA10ORF5350P |
| 5355 | transposase | |||
| 3315 | 109 aa hypothetical protein | |||
| 3320 | M | M.SenU1590ORF19885P (100% identity) | GATC | M.SenLA10ORF3320P |
| 3325 | replication protein A | |||
| 3510 | 75 aa hypothetical protein | |||
| 3515 | M | M.SenU1590ORF19690P (100% identity) | GATC | M.SenLA10ORF3515P |
| 3520 | endonuclease | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 13660 | 33 aa hypothetical protein | |||
| ??? | R | SspA292ORF17210P (100% identity) | CAGAG | SenLA10ORF13670P |
| 13670 | M | M.SenXB08ORF17480P (100% identity) | CAGAG | M.SenLA10ORF13670P |
| 13675 | sugar transporter | |||