Escherichia coli O157:H7 WS4678 |
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Putative Escherichia coli O157:H7 WS4678 RM systems
Ref: Fellner,L. et al. Genome Announc 4 (2) (2016)
REBASE ref # 21898
Contig set: 5,249,643 bp
GenBank #: LKAL00000000 (NZ_LKAL00000000)
REBASE acronym: Eco4678
Org_num: 19357
All begin ORF_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 161 | 82 aa hypothetical protein | |||
| 162 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco4678ORFCP |
| 165 | M | M.EcoPT54II (100% identity) | CACNNNNNNNCTGG | M.Eco4678ORFCP |
| 167 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco4678ORFCP |
| 169 | 113 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4 | recombination protein | |||
| 6 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Eco4678ORFHP |
| 4 | 116 aa hypothetical protein ACU67_25215 | |||
| 5 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco4678ORFGP | |
| 8 | 68 aa hypothetical protein BY68_22700 | |||
| 20 | 101 aa hypothetical protein | |||
| 22 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco4678ORFFP | |
| 25 | 73 aa hypothetical protein | |||
| 63 | drug/metabolite exporter YedA | |||
| 65 | V | V.EcoPT54DcmP (100% identity) | V.Eco4678DcmP | |
| 68 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco4678DcmP |
| 70 | phosphohydrolase | |||
| 318 | Fis family transcriptional regulator | |||
| 319 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco4678ORFDP |
| 320 | membrane protein | |||
| 292 | 138 aa hypothetical protein | |||
| 293 | RM | EcoOS292II (100% identity) | Eco4678ORFBP | |
| 301 | helicase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 172 | 81 aa hypothetical protein Ec53638_1442 | |||
| 173 | R | EcoX21GmrDP (100% identity) | Eco4678GmrDP | |
| ??? | 293 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 467 | cell division protein DamX | |||
| 470 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco4678ORFAP |
| 472 | ribulose-phosphate 3-epimerase | |||