Chromobacterium piscinae ND17 |
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Putative Chromobacterium piscinae ND17 RM systems
Ref: Chan,K.G. and Yunos,N.Y. Genome Announc 4 (2) (2016)
REBASE ref # 21648
Contig set: 4,089,562 bp
GenBank #: JTGE00000000 (NZ_JTGE00000000)
REBASE acronym: CpiND17
Org_num: 19059
All begin QR66_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 19085 | M | M.AsaNS1ORF4210P (82% identity) | M.CpiND17ORF19085P | |
| 19090 | S | S.ChaWI5ORF27315P (60% identity) | S.CpiND17ORF19085P | |
| 19095 | R | 63 aa hypothetical protein | CpiND17ORF19085P | |
| 18965 | 220 aa hypothetical protein | |||
| 18970 | M | M.Csp2610ORF3820P (97% identity) | M.CpiND17ORF18970P | |
| 18975 | S | S.PspLH21ORF3540P (44% identity) | S.CpiND17ORF18970P | |
| 19045 | restriction endonuclease | |||
| 19050 | R | Cvi635ORF18105P (94% identity) | CpiND17ORF19050P | |
| 1600 | 217 aa hypothetical protein | |||
| 1605 | R | Vsp20ORFDP (88% identity) | CpiND17ORF1615P | |
| 1610 | 149 aa hypothetical protein | |||
| 1615 | M | M.Tfr970ORF546P (64% identity) | M.CpiND17ORF1615P | |
| 1620 | S | S.TspGDN1ORF2305P (70% identity) | S.CpiND17ORF1615P | |
| 1625 | 64 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 18380 | M | M.Cva211ORF1500P (84% identity) | M1.CpiND17ORF18380P | |
| 18385 | 109 aa hypothetical protein | |||
| 18390 | M | M1.CspCD1ORF10835P (68% identity) | TGGCCA | M2.CpiND17ORF18380P |
| 18395 | 189 aa hypothetical protein | |||
| 17675 | 388 aa hypothetical protein | |||
| 17680 | M | M.Xsp218FORF3840P (89% identity) | M.CpiND17ORF17680P | |
| 17685 | 156 aa hypothetical protein | |||
| 19365 | M | M.PaeDB1ORF29885P (93% identity) | AGGCCT | M.CpiND17ORF19365P |
| 19370 | R | PaeDB1ORF29885P (98% identity) | AGGCCT | CpiND17ORF19365P |
| 19375 | recombinase | |||
| 5220 | 137 aa hypothetical protein | |||
| 5225 | M | M.CpiND17ORF1790P (82% identity) | M.CpiND17ORF5225P | |
| 5230 | 87 aa hypothetical protein | |||
| 1785 | antitoxin | |||
| 1790 | M | M.Csu3525ORFBP (86% identity) | M.CpiND17ORF1790P | |
| 1795 | 64 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 19040 | pseudogene | |||
| 19045 | R | Csp2602MrrP (100% identity) | CpiND17MrrP | |
| 19050 | DEAD/DEAH box helicase | |||