Salmonella enterica subsp. enterica serovar Moscow SA20061414 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica subsp. enterica serovar Moscow SA20061414 RM systems
Ref: Yoshida,C. et al. Genome Announc 4 (2) (2016)
REBASE ref # 21646
Contig set: 4,792,873 bp
GenBank #: LIXO00000000 (NZ_LIXO00000000)
REBASE acronym: Sen61414
Org_num: 19111
All begin LFZ30_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| ??? | pseudogene | |||
| 11905 | M | M.Sen65575ORF15515P (100% identity) | GGYANNNNNNTCG | M.Sen61414ORF11905P |
| 11910 | S | S.StySBLI (100% identity) | GGYANNNNNNTCG | S.Sen61414ORF11905P |
| 11915 | R | Sen353ORF25305P (98% identity) | GGYANNNNNNTCG | Sen61414ORF11905P |
| 11920 | transporter | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 22440 | 54 aa hypothetical protein | |||
| 22445 | M | M.Sen191ORFCP (99% identity) | ATGCAT | M.Sen61414ORF22445P |
| 22450 | pseudogene | |||
| 3230 | multidrug DMT transporter | |||
| ??? | V | very short patch repair endonuclease | V.Sen61414DcmP | |
| 3240 | M | pseudogene | CCWGG | M.Sen61414DcmP |
| 3245 | pseudogene | |||
| 1045 | cell division protein DamX | |||
| 1050 | M | M.StyTDamP (100% identity) | GATC | M.Sen61414DamP |
| 1055 | ribulose phosphate epimerase | |||
| 7720 | pseudogene | |||
| ??? | M | M.SenD7795ORFEP (84% identity) | M.Sen61414ORFAP | |
| 7730 | 172 aa hypothetical protein | |||
| 7730 | 172 aa hypothetical protein | |||
| 7735 | M | M1.SenSN310ORF7910P (100% identity) | M.Sen61414ORF7735P | |
| 7740 | 79 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17200 | cytochrome D ubiquinol oxidase subunit I | |||
| 17210 | R | Sen65575ORF11190P (100% identity) | CAGAG | Sen61414ORF17215P |
| 17215 | M | M.Sen64ORF16745P (98% identity) | CAGAG | M.Sen61414ORF17215P |
| 17220 | pseudogene | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | hypothetical protein | |||
| ??? | R | Ssp3CMrrP (100% identity) | Sen61414MrrP | |
| 11905 | DNA methyltransferase | |||