Salmonella enterica subsp. enterica serovar Hillingdon S01-0588 |
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Putative Salmonella enterica subsp. enterica serovar Hillingdon S01-0588 RM systems
Ref: Yoshida,C. et al. Genome Announc 4 (2) (2016)
REBASE ref # 21646
Contig set: 4,686,594 bp
GenBank #: LHSX00000000 (NZ_LHSX00000000)
REBASE acronym: Sen588
Org_num: 19095
All begin LFZ91_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 20590 | Fis family transcriptional regulator | |||
| 20595 | M | M.Sen61414ORF22445P (99% identity) | ATGCAT | M.Sen588ORF20595P |
| 20600 | 54 aa hypothetical protein | |||
| 11360 | cell division protein DamX | |||
| 11365 | M | M.StyTDamP (100% identity) | GATC | M.Sen588DamP |
| 11370 | ribulose phosphate epimerase | |||
| 12755 | 254 aa hypothetical protein | |||
| 12760 | M | M.SenTR01mORF15530P (99% identity) | GGCGCC | M.Sen588ORF12760P |
| 12765 | R | SenTR01mORF15530P (45% identity) | GGCGCC | Sen588ORF12760P |
| 12770 | conjugal transfer protein | |||
| 15565 | multidrug DMT transporter | |||
| 15570 | V | very short patch repair protein | V.Sen588DcmP | |
| 15575 | M | M.Sen59899DcmP (100% identity) | CCWGG | M.Sen588DcmP |
| 15580 | hydrolase | |||
| 6520 | DNA repair protein | |||
| 6525 | RM | Kpn8701ORF7450P (95% identity) | Sen588ORF6525P | |
| 6530 | spermidine/putrescine ABC transporter ATPase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2640 | pseudogene | |||
| 2645 | M | M.SspZ69ORF17325P (100% identity) | CAGAG | M.Sen588ORF2645P |
| 2650 | R | Sen59890ORF20525P (99% identity) | CAGAG | Sen588ORF2645P |
| 2655 | 33 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 12010 | 109 aa hypothetical protein | |||
| 12015 | M | M.Cfrz4ORF3170P (98% identity) | GATC | M.Sen588ORF12015P |
| 12020 | 70 aa hypothetical protein | |||