Photorhabdus luminescens subsp. laumondii HP88 |
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Putative Photorhabdus luminescens subsp. laumondii HP88 RM systems
Ref: Ghazal,S. et al. Genome Announc 4 (2) (2016)
REBASE ref # 21572
Contig set: 5,268,201 bp
GenBank #: LJPB00000000 (NZ_LJPB00000000)
REBASE acronym: PluHP88
Org_num: 19116
All begin AA106_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 18960 | S | S.Bsp329ORF10045P (50% identity) | S.PluHP88ORF18960P | |
| 18965 | anticodon nuclease | |||
| 18970 | R | PluTIIP (96% identity) | PluHP88ORF18960P | |
| 18975 | 541 aa hypothetical protein | |||
| 14950 | 82 aa hypothetical protein | |||
| 14955 | M | M.Plu124ORF2730P (96% identity) | M.PluHP88ORF14955P | |
| 14960 | S | S.Pdu1735ORF4435P (19% identity) | S.PluHP88ORF14955P | |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 20195 | 116 aa hypothetical protein | |||
| 20200 | R | PluTIVP (100% identity) | CCWGG | PluHP88ORF20210P |
| 20205 | V | V.PluTIVP (100% identity) | V.PluHP88ORF20210P | |
| 20210 | M | M.PluTIV (100% identity) | CCWGG | M.PluHP88ORF20210P |
| 20215 | unnamed protein product | |||
| 10760 | 94 aa hypothetical protein | |||
| 10765 | R | PluTIIIP (100% identity) | AGGCCT | PluHP88ORF10770P |
| 10770 | M | M.PluTIII (100% identity) | AGGCCT | M.PluHP88ORF10770P |
| 10775 | flagellar biosynthetic protein FliR | |||
| 18765 | holin | |||
| 18770 | M | M.Pte15199ORF11645P (99% identity) | M.PluHP88ORF18770P | |
| 14415 | ribulose phosphate epimerase | |||
| 14420 | M | M.PluTDamP (100% identity) | GATC | M.PluHP88DamP |
| 14425 | 308 aa hypothetical protein | |||
| 8155 | 145 aa hypothetical protein | |||
| 8160 | M | M.PluTORF3449P (100% identity) | M.PluHP88ORF8160P | |
| 8165 | 116 aa hypothetical protein | |||
| 11355 | transposase | |||
| 11360 | RM | PluTORF233P (100% identity) | PluHP88ORF11360P | |
| 11365 | 115 aa hypothetical protein | |||
| 4020 | 4-hydroxy-tetrahydrodipicolinate reductase | |||
| 4025 | M | M.PluTI (100% identity) | GGCGCC | M.PluHP88ORF4025P |
| ??? | R | PluTI (100% identity) | GGCGCC | PluHP88ORF4025P |
| 4035 | ATP-dependent endonuclease | |||
| 410 | recombinase | |||
| ??? | M | M.PluTV (100% identity) | CTCGAG | M.PluHP88ORF415P |
| 420 | R | PluTVP (100% identity) | CTCGAG | PluHP88ORF415P |
| 425 | abortive infection family protein | |||