Streptococcus pneumoniae Taiwan19F-14 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Streptococcus pneumoniae Taiwan19F-14 RM systems
Ref: Hotopp,J.D. et al. unpublished
REBASE ref # 10491
Complete sequence: 2,112,148 bp
GenBank #: CP000921 (NC_012469)
REBASE acronym: SpnT
Org_num: 5379
All begin SPT_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 541 | 49 aa hypothetical protein | |||
| 543 | S | S2.Spn75ORF2520P (100% identity) | S1.SpnTORF544P | |
| 542 | S | S1.Spn99176ORF2585P (100% identity) | CRAANNNNNNNNCTT | S2.SpnTORF544P |
| 544 | M | M.SpnSWU02ORFDP (100% identity) | CRAANNNNNNNNCTT | M.SpnTORF544P |
| 545 | R | SpnSWU02ORFDP (100% identity) | CRAANNNNNNNNCTT | SpnTORF544P |
| 546 | 42 aa conserved hypothetical protein | |||
| 1307 | chlorohydrolase | |||
| 1308 | R | SpnSWU02ORFBP (100% identity) | TGANNNNNNNTATC | SpnTORF1314P |
| 1309 | S | S.SpnSP87III (100% identity) | TGANNNNNNNTATC | S.SpnTORF1314AP |
| 1310 | integrase/recombinase, phage integrase family | |||
| 1311 | prophage maintenance system killer protein | |||
| 1312 | 78 aa conserved hypothetical protein | |||
| 1313 | S | S1.SpnSP87II (100% identity) | TGANNNNNNNTATC | S.SpnTORF1314BP |
| 1314 | M | M.SpnsD39dORF3010P (100% identity) | TGANNNNNNNTATC | M.SpnTORF1314P |
| 1315 | 41 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 842 | pseudogene | |||
| 843 | M | M.Spns521III (100% identity) | TCTAGA | M.SpnTORF843P |
| 845 | R | SpnSWU02ORFCP (100% identity) | TCTAGA | SpnTORF843P |
| 846 | peptidase, U32 family protein | |||
| 1766 | protein DpnD | |||
| 1767 | R | SpnsD39dORF3910P (100% identity) | GATC | SpnTORF1767P |
| 1768 | thioesterase family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 976 | 56 aa hypothetical protein | |||
| 977 | R | SpnZGXMcrBP (100% identity) | SpnTMcrBP | |
| 978 | R | SpnSWU02McrCP (98% identity) | SpnTMcrCP | |
| 979 | guanosine monophosphate reductase | |||