Pseudomonas syringae pv. syringae Alf3 |
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Putative Pseudomonas syringae pv. syringae Alf3 RM systems
Ref: Harrison,J. et al. Genome Announc 4 (1), e01722-15 (2016)
REBASE ref # 21403
Contig set: 5,806,984 bp
GenBank #: JPNN00000000 (NZ_JPNN00000000)
REBASE acronym: PsyALF3
Org_num: 18376
All begin HM80_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 6215 | 635 aa hypothetical protein | |||
| 6220 | R | Psp22131ORFBP (92% identity) | PsyALF3ORF6235P | |
| 6225 | anticodon nuclease | |||
| 6230 | S | S.Psp21036ORF5520P (58% identity) | S.PsyALF3ORF6235P | |
| 6235 | M | M.Psp22131ORFBP (92% identity) | M.PsyALF3ORF6235P | |
| 6240 | restriction endonuclease | |||
| 21585 | S | S.PflWaORFAP (91% identity) | S.PsyALF3ORF21590P | |
| 21590 | M | M.PflWaORFAP (97% identity) | M.PsyALF3ORF21590P | |
| 21595 | R | CmeDORF45490P (99% identity) | PsyALF3ORF21590P | |
| 21600 | ATP F0F1 synthase synthase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 11945 | 196 aa hypothetical protein | |||
| 11950 | M | M.Psy5095ORF8250P (100% identity) | M.PsyALF3ORF11950P | |
| 11965 | 88 aa hypothetical protein | |||
| 17565 | 72 aa hypothetical protein | |||
| 17570 | M | M.PsyFF5ORFCP (88% identity) | M.PsyALF3ORF17570P | |
| 17575 | 176 aa hypothetical protein | |||
| 17845 | 154 aa hypothetical protein | |||
| 17850 | M | M.Psy91ORF10515P (93% identity) | AAGCTT | M.PsyALF3ORF17850P |
| 17855 | 209 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7460 | pseudogene | |||
| 7465 | R | PsyFF5McrC2P (100% identity) | PsyALF3McrCP | |
| 7470 | R | Psy5095McrBP (100% identity) | PsyALF3McrBP | |
| 7475 | phage antirepressor protein | |||
| 6235 | restriction endonuclease EcoR124II subunit M | |||
| 6240 | R | Xar1586MrrP (96% identity) | PsyALF3MrrP | |
| 6245 | regulatory protein MarR | |||