Escherichia fergusonii ATCC 35469 |
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Putative Escherichia fergusonii ATCC 35469 RM systems
Ref: Genoscope -,C.E.A. unpublished
REBASE ref # 10128
| Sequence length: | GenBank #: | |
| Chromosome: | 4,588,711 bp | CU928158 (NC_011740) |
| plasmid pEFER: | 55,150 bp | CU928144 (NC_011743) |
REBASE acronym: Efe
Org_num: 5259
All begin EFER_, EFER_p
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3078 | 253 aa conserved hypothetical protein | |||
| 3079 | R | Efe1499ORF20780P (100% identity) | CAAYNNNNNNNTGAG | EfeIP |
| 3080 | M | M.Efe1499ORF20780P (100% identity) | CAAYNNNNNNNTGAG | M.EfeI |
| 3081 | S | S.Efe1499ORF20780P (100% identity) | CAAYNNNNNNNTGAG | S.EfeI |
| 3082 | 132 aa conserved hypothetical protein | |||
| 3100 | 433 aa hypothetical protein | |||
| 3101 | S | S.Efe44C21ORF18600P (100% identity) | CRAANNNNNRTGG | S.EfeII |
| 3102 | M | M.Efe44C21ORF18600P (100% identity) | CRAANNNNNRTGG | M.EfeII |
| 3103 | 128 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 588 | 164 aa conserved hypothetical protein; CPS-53 (KpLE1) | |||
| 589 | M | M.Eco043ORF2133P (99% identity) | GATC | M.EfeORF589P |
| 590 | LexA repressor | |||
| 2728 | exonuclease from phage origin | |||
| 2729 | M | M.Efe38C01ORF14145P (100% identity) | GATC | M.EfeORF2729P |
| 2730 | 104 aa conserved hypothetical protein from | |||
| 3240 | global DNA-binding transcriptional dual | |||
| 3241 | M | M.EfeEF04ORF209900P (100% identity) | ATGCAT | M.EfeIV |
| 3242 | 54 aa conserved hypothetical protein | |||
| 3352 | D-ribulose-5-phosphate 3-epimerase | |||
| 3353 | M | M.EfeTDamP (100% identity) | GATC | M.EfeDamP |
| 3354 | 426 aa conserved hypothetical protein | |||
| 4069 | isocitrate dehydrogenase kinase/phosphatase | |||
| 4070 | M | M.EfeEF03ORF210075P (100% identity) | CCWGG | M.EfeIII |
| 4071 | DNA-binding transcriptional repressor | |||
| plasmid pEFER | ||||
| 24 | 587 aa conserved hypothetical protein | |||
| 25 | M | Efe1499ORF22165P (100% identity) | GCTAAT | M.EfeV |
| 26 | 885 aa conserved hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3082 | 132 aa conserved hypothetical protein | |||
| 3083 | R | EfeTMcrBP (100% identity) | EfeMcrBP | |
| 3084 | R | EfeEF02McrCP (100% identity) | EfeMcrCP | |
| 3103 | 128 aa hypothetical protein | |||
| 3104 | R | Efe1499McrCP (100% identity) | EfeMcrC2P | |
| 3105 | R | Efe1McrBP (100% identity) | EfeMcrB2P | |
| 3106 | 337 aa conserved hypothetical protein; putative | |||