Burkholderia species Bp5365 MSMB43 |
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Putative Burkholderia species Bp5365 MSMB43 RM systems
Ref: Sahl,J. et al. unpublished
REBASE ref # 21205
| Sequence length: | GenBank #: | |
| chromosome 1: | 4,069,152 bp | CP013380 |
| chromosome 2: | 2,913,543 bp | CP013382 |
| plasmid pMSMB43: | 305,114 bp | CP013381 |
REBASE acronym: Bsp5365
Org_num: 17917
All begin AQ610_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 5710 | ABC transporter | |||
| 5715 | R | Bth43ORFCP (100% identity) | GGANNNNNNNRTGGC | Bsp5365ORF5720P |
| ??? | S | S.Bth43ORFCP (100% identity) | GGANNNNNNNRTGGC | S.Bsp5365ORF5720P |
| 5720 | M | M.Bth43ORFCP (100% identity) | GGANNNNNNNRTGGC | M.Bsp5365ORF5720P |
| 5725 | 404 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 15 | DNA gyrase subunit B | |||
| 20 | M | M.Bth43ORFBP (100% identity) | RGATCY | M.Bsp5365ORF20P |
| ??? | R | Bth43ORFBP (100% identity) | RGATCY | Bsp5365ORF20P |
| 25 | transposase | |||
| 2390 | chromosome segregation protein SMC | |||
| 2395 | RM | Bth43ORFKP (100% identity) | Bsp5365ORF2395P | |
| 2400 | helicase SNF2 | |||
| 2760 | 111 aa hypothetical protein | |||
| 2765 | M | M.Bth1687ORFIP (100% identity) | AGCT | M.Bsp5365ORF2765P |
| 2770 | 510 aa hypothetical protein | |||
| 2775 | 746 aa hypothetical protein | |||
| 2780 | 275 aa hypothetical protein | |||
| 2785 | V | V.BceYG3ORF2755P (82% identity) | V.Bsp5365ORF2765P | |
| 2790 | 127 aa hypothetical protein | |||
| 5300 | glycosyl transferase family 25 | |||
| 5305 | M | M.Bth43ORFDP (100% identity) | M.Bsp5365ORF5305P | |
| 5310 | 130 aa hypothetical protein | |||
| chromosome 2 | ||||
| 22145 | tryptophan synthase subunit beta | |||
| 22150 | M | M.Bth43ORFIP (100% identity) | GTWWAC | M.Bsp5365ORF22150P |
| 22155 | tryptophan synthase subunit alpha | |||
| 25265 | baseplate assembly protein | |||
| ??? | M | M.Bth43ORFHP (100% identity) | M.Bsp5365ORF25275P | |
| 25280 | phage tail protein | |||
| 25410 | 618 aa hypothetical protein | |||
| ??? | M | M.Bth43ORFFP (100% identity) | M.Bsp5365ORF25415P | |
| 25425 | 79 aa hypothetical protein | |||
| 29300 | reverse transcriptase | |||
| 29305 | M | M.Bth43ORFNP (100% identity) | M.Bsp5365ORF29305P | |
| 29310 | 499 aa hypothetical protein | |||
| plasmid pMSMB43 | ||||
| 18360 | 165 aa hypothetical protein | |||
| ??? | M | M.Bth43ORFLP (100% identity) | M.Bsp5365ORF18365P | |
| 18370 | 169 aa hypothetical protein | |||
| 18565 | conjugal transfer protein TraF | |||
| 18570 | M | M.Bth43ORFMP (100% identity) | CCCGGG | M.Bsp5365ORF18570P |
| 18575 | 152 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 190 | porin | |||
| 195 | R | Bth43ORFAP (100% identity) | CACAG | Bsp5365ORF200P |
| ??? | M | M.Bth43ORFAP (100% identity) | CACAG | M.Bsp5365ORF200P |
| 205 | porin | |||