Escherichia coli SE11 |
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Putative Escherichia coli SE11 RM systems
Ref: Oshima,K. et al. (er) DNA Res., doi:10.1093/dnares/dsn026 (2008)
REBASE ref # 10795
| Sequence length: | GenBank #: | |
| Chromosome: | 4,887,515 bp | AP009240 (NC_011415) |
| plasmid pSE11-1: | 100,021 bp | AP009241 (NC_011419) |
| plasmid pSE11-2: | 91,158 bp | AP009242 (NC_011413) |
REBASE acronym: EcoSE11
Org_num: 5178
All begin ECSE_, ECSE_P1-, ECSE_P2-
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2076 | 92 aa hypothetical protein | |||
| 2077 | M | M.Eco8196ORF1822P (98% identity) | M.EcoSE11ORF2077P | |
| 2078 | 65 aa hypothetical phage protein | |||
| 2189 | 306 aa conserved hypothetical protein | |||
| 2190 | V | V.SsoSE61DcmP (100% identity) | V.EcoSE11ORF2191P | |
| 2191 | DNA cytosine methylase | |||
| 2190 | DNA mismatch endonuclease | |||
| 2191 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoSE11DcmP |
| 2192 | 231 aa conserved hypothetical protein | |||
| 3542 | DNA-binding protein | |||
| 3543 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoSE11ORF3543P |
| 3544 | 68 aa conserved hypothetical protein | |||
| 3647 | D-ribulose-5-phosphate 3-epimerase | |||
| 3648 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoSE11DamP |
| 3649 | 428 aa conserved hypothetical protein | |||
| 4570 | partial phage integrase | |||
| 4571 | R | EcoMc31DptFP (100% identity) | EcoSE11DptFP | |
| 4572 | 440 aa hypothetical protein | |||
| 4571 | 549 aa hypothetical protein | |||
| 4572 | R | EcoH74DptGP (100% identity) | EcoSE11DptGP | |
| 4573 | 1700 aa hypothetical protein | |||
| 4572 | 440 aa hypothetical protein | |||
| 4573 | R | EcoCF111DptHP (100% identity) | EcoSE11DptHP | |
| 4574 | restriction endonuclease | |||
| 4575 | 206 aa hypothetical protein | |||
| 4576 | M | M.EcoMc31DndEP (100% identity) | M.EcoSE11DndEP | |
| 4577 | 681 aa conserved hypothetical protein | |||
| 4576 | 117 aa hypothetical protein | |||
| 4577 | M | M.EcoH74DndDP (100% identity) | M.EcoSE11DndDP | |
| 4578 | 3-phosphoadenosine 5-phosphosulfate | |||
| 4577 | 681 aa conserved hypothetical protein | |||
| 4578 | M | M.EcoMc31DndCP (100% identity) | M.EcoSE11DndCP | |
| 4579 | 361 aa conserved hypothetical protein | |||
| 4578 | 3-phosphoadenosine 5-phosphosulfate | |||
| 4579 | M | M.EcoMc31DndBP (100% identity) | M.EcoSE11DndBP | |
| 4580 | transposase | |||
| plasmid pSE11-1 | ||||
| 46 | 103 aa conserved hypothetical protein | |||
| 47 | M | M.Sen1337ORF11922P (100% identity) | M.EcoSE11ORF47P | |
| 48 | 73 aa conserved hypothetical protein | |||
| plasmid pSE11-2 | ||||
| 26 | 103 aa conserved hypothetical protein | |||
| 27 | M | M.SenBR027ORFEP (100% identity) | M.EcoSE11ORF27P | |
| 28 | 73 aa conserved hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4574 | R | EcoCF111MrrP (100% identity) | EcoSE11MrrP | |
| 4575 | 206 aa hypothetical protein | |||