Escherichia coli O157:H7 EC4115 |
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Putative Escherichia coli O157:H7 EC4115 RM systems
Ref: Eppinger,M. et al. unpublished
REBASE ref # 10786
| Sequence length: | GenBank #: | |
| Chromosome: | 5,572,075 bp | CP001164 (NC_011353) |
| plasmid pO157: | 94,644 bp | CP001163 (NC_011350) |
REBASE acronym: Eco4115
Org_num: 5169
All begin ECH74115_, ECH74115_B
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5858 | HSP20-like domain protein | |||
| 5859 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco4115ORF5860P |
| 5860 | M | M.EcoX21ORF4993P (100% identity) | CACNNNNNNNCTGG | M.Eco4115ORF5860P |
| 5861 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco4115ORF5860P |
| 5862 | DUF262 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1766 | 65 aa conserved hypothetical protein | |||
| 1767 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco4115ORF1767P | |
| 1770 | 52 aa hypothetical protein, partial | |||
| 1847 | 65 aa conserved hypothetical protein | |||
| 1848 | M | M.EcoTWORF1742P (100% identity) | M.Eco4115ORF1848P | |
| 1849 | 39 aa hypothetical protein | |||
| 2737 | carboxylate/amino acid/amine transporter | |||
| 2736 | V | V.EcosPA8DcmP (100% identity) | V.Eco4115DcmP | |
| 2738 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco4115DcmP |
| 2739 | metal-dependent phosphohydrolase | |||
| 2915 | open reading frame | |||
| 2916 | M | M.Eph2851ORFAP (100% identity) | GATC | M.Eco4115ORF2916P |
| 2917 | NinB | |||
| 3150 | 39 aa hypothetical protein | |||
| 3151 | M | M.EcoTWORF1742P (100% identity) | M.Eco4115ORF3151P | |
| 3152 | 65 aa conserved hypothetical protein | |||
| 3544 | 224 aa conserved hypothetical protein | |||
| 3545 | M | M.EcoTWORF3263P (100% identity) | GATC | M.Eco4115ORF3545P |
| 3546 | 39 aa hypothetical protein | |||
| 3575 | 55 aa conserved hypothetical protein | |||
| 3576 | M | M.EspP079ORF2847P (100% identity) | GATC | M.Eco4115ORF3576P |
| 3577 | conserved domain protein | |||
| 4578 | DNA-binding protein Fis | |||
| 4579 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco4115ORF4579P |
| 4580 | 37 aa conserved hypothetical protein | |||
| 4690 | ribulose-phosphate 3-epimerase | |||
| 4691 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco4115DamP |
| 4692 | DamX protein | |||
| 5534 | 65 aa conserved hypothetical protein | |||
| ??? | M | M.Ecos1613ORF25555P (100% identity) | M.Eco4115ORF5535P | |
| 5537 | Eae protein | |||
| 5808 | helicase family protein | |||
| 5809 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco4115ORF5809P |
| plasmid pO157 | ||||
| 49 | 41 aa conserved hypothetical protein | |||
| 50 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco4115ORF50P | |
| 51 | 73 aa conserved hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5855 | 54 aa conserved hypothetical protein | |||
| 5856 | R | Ecos1613GmrSP (100% identity) | Eco4115GmrSP | |
| 5857 | R | EcosPA8GmrSDP (55% identity) | Eco4115GmrDP | |
| 5858 | HSP20-like domain protein | |||