REBASE Home

Pseudoalteromonas tetraodonis UCD-SED8

[index] - [schematics] - [save as Word doc]
 REBASE Genomes

Putative Pseudoalteromonas tetraodonis UCD-SED8 RM systems

Ref: Lee,R.D. et al. Genome Announc 3 (6), e01276-15 (2015)

REBASE ref # 20999

Contig set: 4,016,359 bp

GenBank #: LITK00000000 (NZ_LITK00000000)

REBASE acronym: PteSED8

Org_num: 17595

 

All begin AMS57_

Type I
ORF Gene Most similar Specificity Name
 
6485 189 aa hypothetical protein
6490 M M.Pag2018ORF19020P (89% identity) M.PteSED8ORF6490P
6495 S S.EcoGD33ORF9635P (45% identity) S1.PteSED8ORF6490P
6500 578 aa hypothetical protein
6505 584 aa hypothetical protein
6510 390 aa hypothetical protein
6515 R Psp520P1ORFCP (91% identity) PteSED8ORF6490P
6520 metal-dependent hydrolase
Type II
ORF Gene Most similar Specificity Name
 
220 566 aa hypothetical protein
225 M M.MspFW1ORFAP (52% identity) M.PteSED8ORF225P
230 integrase
 
14655 61 aa hypothetical protein
14660 M M.Psp161bDamP (100% identity) GATC M.PteSED8DamP
14665 cell division protein DamX
Type IV
ORF Gene Most similar Specificity Name
 
6155 262 aa hypothetical protein
6160 R PteGFCORF130P (96% identity) PteSED8ORF6160P
6165 277 aa hypothetical protein
Tech Support Feedback NEB Overview Site Map Trademarks Legal and Disclaimers Privacy Cookie Policy Terms of Use
© Copyright 2023 New England Biolabs. All Rights Reserved.