Streptococcus suis ISU2812 |
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Putative Streptococcus suis ISU2812 RM systems
Ref: Hau,S.J. et al. Genome Announc 3 (6), e01301-15 (2015)
REBASE ref # 20989
Contig set: 2,259,350 bp
GenBank #: LDOK00000000 (NZ_LDOK00000000)
REBASE acronym: Ssu2812
Org_num: 17559
All begin XK26_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5740 | transposase | |||
| 5745 | R | Ssu4ORF10810P (100% identity) | Ssu2812ORF5765P | |
| 5750 | cell filamentation protein Fic | |||
| 5755 | 1402 aa hypothetical protein | |||
| 5760 | S | S1.SsuAKJ18ORF1640P (100% identity) | S.Ssu2812ORF5765P | |
| 5765 | M | M.Ssu4ORF10810P (100% identity) | M.Ssu2812ORF5765P | |
| 5770 | beta-lactamase | |||
| 7305 | R | Ssu2812ORF9240AP (100% identity) | Ssu2812ORF7305P | |
| 7310 | pyridine nucleotide-disulfide oxidoreductase | |||
| 3175 | integrase | |||
| 3180 | S | S3.SsuTJ575ORFGP (64% identity) | S1.Ssu2812ORF3205P | |
| 3185 | R | Ssu4ORF3320P (99% identity) | Ssu2812ORF3205P | |
| 3190 | type I restriction endonuclease subunit S | |||
| 3195 | cell filamentation protein Fic | |||
| 3200 | S | S3.Ssu4ORF3320P (42% identity) | S2.Ssu2812ORF3205P | |
| 3205 | M | M.Ssu4ORF3320P (100% identity) | M.Ssu2812ORF3205P | |
| 3210 | serine--tRNA ligase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2180 | DNA-binding protein | |||
| 2185 | RM | SspHN38ORFAP (19% identity) | Ssu2812ORF2185BP | |
| 2190 | RM | Ssu2812ORF1175AP (99% identity) | Ssu2812ORF2185AP | |
| 2195 | M | M.Ssu4ORF1260P (100% identity) | M.Ssu2812ORF2185P | |
| 2200 | 30S ribosomal protein S9 | |||
| 880 | DNA topoisomerase IV | |||
| 885 | S | S.SsuAKJ18ORF5795P (36% identity) | S.Ssu2812ORF890P | |
| 890 | RM | SsuAKJ18ORF5795P (100% identity) | Ssu2812ORF890P | |
| 895 | GTP pyrophosphokinase | |||
| 2675 | 66 aa hypothetical protein | |||
| 2680 | R | Ssu48ORF2145P (99% identity) | GAATTC | Ssu2812ORF2685P |
| 2685 | M | M.SsuAKJ18ORF8805P (100% identity) | GAATTC | M.Ssu2812ORF2685P |
| 2690 | 428 aa hypothetical protein | |||
| 8395 | 142 aa hypothetical protein | |||
| 8400 | M | M.Ssu4ORF6445P (100% identity) | M.Ssu2812ORF8400P | |
| 8405 | replication initiator protein | |||
| 3775 | 79 aa hypothetical protein | |||
| 3780 | M | M.Ssu130302ORF8325P (94% identity) | GATC | M.Ssu2812ORF3780P |
| 3785 | 708 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7565 | pseudogene | |||
| 7570 | R | Ssu4ORF2610P (100% identity) | GCGATD | Ssu2812ORF7575P |
| 7575 | M | M.Ssu5ORF2390P (100% identity) | GCGATD | M.Ssu2812ORF7575P |
| 7580 | 203 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7285 | GMP synthase | |||
| 7290 | R | Ssu4McrCP (100% identity) | Ssu2812McrCP | |
| 7295 | R | Ssu4McrBP (100% identity) | Ssu2812McrBP | |
| 7300 | transposase | |||